Gene : Glyma.17G214900 G. max Wm82.a2.v1
Defline:  (1 of 79) 3.1.4.46 - Glycerophosphodiester phosphodiesterase / Glycerophosphoryl diester phosphodiesterase Genomic Order:  2149
Name:  ? Glyma.17G214900 Secondary Identifier:  ? PAC:30480587
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7409 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G214900 0.5kb upstream 0.5kb upstream 4766   true Chr17: 36078041-36082806 Glycine max
Glyma.17G214900 0.5kb upstream 0.5kb upstream 500   false Chr17: 36082307-36082806 Glycine max
Glyma.17G214900 0.5kb downstream 0.5kb downstream 4766   true Chr17: 36077541-36082306 Glycine max
Glyma.17G214900 0.5kb downstream 0.5kb downstream 500   false Chr17: 36077541-36078040 Glycine max
Glyma.17G214900 1.0kb upstream 1.0kb upstream 5266   true Chr17: 36078041-36083306 Glycine max
Glyma.17G214900 1.0kb upstream 1.0kb upstream 1000   false Chr17: 36082307-36083306 Glycine max
Glyma.17G214900 1.0kb downstream 1.0kb downstream 5266   true Chr17: 36077041-36082306 Glycine max
Glyma.17G214900 1.0kb downstream 1.0kb downstream 1000   false Chr17: 36077041-36078040 Glycine max
Glyma.17G214900 2.0kb upstream 2.0kb upstream 6266   true Chr17: 36078041-36084306 Glycine max
Glyma.17G214900 2.0kb upstream 2.0kb upstream 2000   false Chr17: 36082307-36084306 Glycine max
Glyma.17G214900 2.0kb downstream 2.0kb downstream 6266   true Chr17: 36076041-36082306 Glycine max
Glyma.17G214900 2.0kb downstream 2.0kb downstream 2000   false Chr17: 36076041-36078040 Glycine max
Glyma.17G214900 5.0kb upstream 5.0kb upstream 9266   true Chr17: 36078041-36087306 Glycine max
Glyma.17G214900 5.0kb upstream 5.0kb upstream 5000   false Chr17: 36082307-36087306 Glycine max
Glyma.17G214900 5.0kb downstream 5.0kb downstream 9266   true Chr17: 36073041-36082306 Glycine max
Glyma.17G214900 5.0kb downstream 5.0kb downstream 5000   false Chr17: 36073041-36078040 Glycine max
Glyma.17G214900 10.0kb upstream 10.0kb upstream 14266   true Chr17: 36078041-36092306 Glycine max
Glyma.17G214900 10.0kb upstream 10.0kb upstream 10000   false Chr17: 36082307-36092306 Glycine max
Glyma.17G214900 10.0kb downstream 10.0kb downstream 14266   true Chr17: 36068041-36082306 Glycine max
Glyma.17G214900 10.0kb downstream 10.0kb downstream 10000   false Chr17: 36068041-36078040 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314435 5265 Fabidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.58371 0.0 22.502   High
cufflinks 0.13313 0.0 0.520599 Low  
cufflinks 3.30367 0.0 13.1377   High
cufflinks 0.224778 0.0 0.858203    
cufflinks 0.0767832 0.0 0.306688 Low  
cufflinks 0.177787 0.0 0.880144 Low  
cufflinks 0.00750767 0.0 0.044854 Low Low
cufflinks 0.949447 0.0 6.74535    
cufflinks 0.105686 0.0 0.417567 Low  
cufflinks 0.269       High
cufflinks 0.141        
cufflinks 0.431       High
cufflinks 0.043     Low  
cufflinks 0.005     Low Low
cufflinks 0.008     Low Low
cufflinks 0.052     Low  
cufflinks 0.482       High
cufflinks 0.148        
cufflinks 0.028     Low  
cufflinks 0.004     Low Low
cufflinks 0.044     Low  
cufflinks 0.038     Low  
cufflinks 0.12        
cufflinks 0.028     Low  
cufflinks 0.023     Low  
cufflinks 0.168        

0 Strain