Gene : Glyma.17G215500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11850:SF122 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 3-RELATED Genomic Order:  2155
Name:  ? Glyma.17G215500 Secondary Identifier:  ? PAC:30481963
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G215500 0.5kb upstream 0.5kb upstream 5826   true Chr17: 36212363-36218188 Glycine max
Glyma.17G215500 0.5kb upstream 0.5kb upstream 500   false Chr17: 36217689-36218188 Glycine max
Glyma.17G215500 0.5kb downstream 0.5kb downstream 5826   true Chr17: 36211863-36217688 Glycine max
Glyma.17G215500 0.5kb downstream 0.5kb downstream 500   false Chr17: 36211863-36212362 Glycine max
Glyma.17G215500 1.0kb upstream 1.0kb upstream 6326   true Chr17: 36212363-36218688 Glycine max
Glyma.17G215500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 36217689-36218688 Glycine max
Glyma.17G215500 1.0kb downstream 1.0kb downstream 6326   true Chr17: 36211363-36217688 Glycine max
Glyma.17G215500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 36211363-36212362 Glycine max
Glyma.17G215500 2.0kb upstream 2.0kb upstream 7326   true Chr17: 36212363-36219688 Glycine max
Glyma.17G215500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 36217689-36219688 Glycine max
Glyma.17G215500 2.0kb downstream 2.0kb downstream 7326   true Chr17: 36210363-36217688 Glycine max
Glyma.17G215500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 36210363-36212362 Glycine max
Glyma.17G215500 5.0kb upstream 5.0kb upstream 10326   true Chr17: 36212363-36222688 Glycine max
Glyma.17G215500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 36217689-36222688 Glycine max
Glyma.17G215500 5.0kb downstream 5.0kb downstream 10326   true Chr17: 36207363-36217688 Glycine max
Glyma.17G215500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 36207363-36212362 Glycine max
Glyma.17G215500 10.0kb upstream 10.0kb upstream 15326   true Chr17: 36212363-36227688 Glycine max
Glyma.17G215500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 36217689-36227688 Glycine max
Glyma.17G215500 10.0kb downstream 10.0kb downstream 15326   true Chr17: 36202363-36217688 Glycine max
Glyma.17G215500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 36202363-36212362 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250160 5265 Fabidae View MSA
124065932 5270 Rosid View MSA
123749980 5271 Pentapetalae View MSA
122794355 5272 Eudicot View MSA
122041935 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.7521 0.0 43.6273   High
cufflinks 3.38212 0.0 13.0221   Low
cufflinks 7.2453 0.0 26.5588    
cufflinks 7.07168 0.0 25.8888    
cufflinks 4.59187 0.0 15.8783    
cufflinks 13.9938 0.0 47.7127   High
cufflinks 4.37025 0.0 15.3601    
cufflinks 11.2886 0.0 38.9234    
cufflinks 5.54261 0.0 21.3799    
cufflinks 1.097        
cufflinks 0.373       Low
cufflinks 0.853        
cufflinks 1.021        
cufflinks 0.461       Low
cufflinks 1.008        
cufflinks 1.224        
cufflinks 0.788        
cufflinks 0.518       Low
cufflinks 0.985        
cufflinks 1.206        
cufflinks 0.749        
cufflinks 1.526       High
cufflinks 2.435       High
cufflinks 0.661        
cufflinks 1.045        
cufflinks 0.725        

0 Strain