Gene : Glyma.17G215700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21512:SF5 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 Genomic Order:  2157
Name:  ? Glyma.17G215700 Secondary Identifier:  ? PAC:30478478
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G215700 0.5kb upstream 0.5kb upstream 9975   true Chr17: 36319785-36329759 Glycine max
Glyma.17G215700 0.5kb upstream 0.5kb upstream 500   false Chr17: 36329260-36329759 Glycine max
Glyma.17G215700 0.5kb downstream 0.5kb downstream 9975   true Chr17: 36319285-36329259 Glycine max
Glyma.17G215700 0.5kb downstream 0.5kb downstream 500   false Chr17: 36319285-36319784 Glycine max
Glyma.17G215700 1.0kb upstream 1.0kb upstream 10475   true Chr17: 36319785-36330259 Glycine max
Glyma.17G215700 1.0kb upstream 1.0kb upstream 1000   false Chr17: 36329260-36330259 Glycine max
Glyma.17G215700 1.0kb downstream 1.0kb downstream 10475   true Chr17: 36318785-36329259 Glycine max
Glyma.17G215700 1.0kb downstream 1.0kb downstream 1000   false Chr17: 36318785-36319784 Glycine max
Glyma.17G215700 2.0kb upstream 2.0kb upstream 11475   true Chr17: 36319785-36331259 Glycine max
Glyma.17G215700 2.0kb upstream 2.0kb upstream 2000   false Chr17: 36329260-36331259 Glycine max
Glyma.17G215700 2.0kb downstream 2.0kb downstream 11475   true Chr17: 36317785-36329259 Glycine max
Glyma.17G215700 2.0kb downstream 2.0kb downstream 2000   false Chr17: 36317785-36319784 Glycine max
Glyma.17G215700 5.0kb upstream 5.0kb upstream 14475   true Chr17: 36319785-36334259 Glycine max
Glyma.17G215700 5.0kb upstream 5.0kb upstream 5000   false Chr17: 36329260-36334259 Glycine max
Glyma.17G215700 5.0kb downstream 5.0kb downstream 14475   true Chr17: 36314785-36329259 Glycine max
Glyma.17G215700 5.0kb downstream 5.0kb downstream 5000   false Chr17: 36314785-36319784 Glycine max
Glyma.17G215700 10.0kb upstream 10.0kb upstream 19475   true Chr17: 36319785-36339259 Glycine max
Glyma.17G215700 10.0kb upstream 10.0kb upstream 10000   false Chr17: 36329260-36339259 Glycine max
Glyma.17G215700 10.0kb downstream 10.0kb downstream 19475   true Chr17: 36309785-36329259 Glycine max
Glyma.17G215700 10.0kb downstream 10.0kb downstream 10000   false Chr17: 36309785-36319784 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304188 5265 Fabidae View MSA
124062014 5270 Rosid View MSA
123736425 5271 Pentapetalae View MSA
122786801 5272 Eudicot View MSA
122047010 5273 Angiosperm View MSA
121344972 5274 Embryophyte View MSA
123380135 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.1629 0.0 30.9999   High
cufflinks 7.00162 0.0 21.3357    
cufflinks 6.84304 0.0 23.4695   Low
cufflinks 10.5653 0.0 32.7536   High
cufflinks 10.1196 0.0 31.5411    
cufflinks 6.52389 0.0 20.8754   Low
cufflinks 8.63033 0.0 26.7688    
cufflinks 9.28654 0.0 29.2089    
cufflinks 7.6115 0.0 23.75    
cufflinks 5.093        
cufflinks 2.523       Low
cufflinks 4.112        
cufflinks 5.776        
cufflinks 6.014        
cufflinks 4.128        
cufflinks 5.519        
cufflinks 2.566       Low
cufflinks 4.523        
cufflinks 5.486        
cufflinks 6.669       High
cufflinks 3.407        
cufflinks 6.062       High
cufflinks 4.087        
cufflinks 3.277        
cufflinks 6.141       High
cufflinks 3.441        

0 Strain