Gene : Glyma.17G216500 G. max Wm82.a2.v1
Defline:  (1 of 31) PF05910 - Plant protein of unknown function (DUF868) (DUF868) Genomic Order:  2165
Name:  ? Glyma.17G216500 Secondary Identifier:  ? PAC:30478902
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G216500 0.5kb upstream 0.5kb upstream 2495   true Chr17: 36492121-36494615 Glycine max
Glyma.17G216500 0.5kb upstream 0.5kb upstream 500   false Chr17: 36492121-36492620 Glycine max
Glyma.17G216500 0.5kb downstream 0.5kb downstream 2495   true Chr17: 36492621-36495115 Glycine max
Glyma.17G216500 0.5kb downstream 0.5kb downstream 500   false Chr17: 36494616-36495115 Glycine max
Glyma.17G216500 1.0kb upstream 1.0kb upstream 2995   true Chr17: 36491621-36494615 Glycine max
Glyma.17G216500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 36491621-36492620 Glycine max
Glyma.17G216500 1.0kb downstream 1.0kb downstream 2995   true Chr17: 36492621-36495615 Glycine max
Glyma.17G216500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 36494616-36495615 Glycine max
Glyma.17G216500 2.0kb upstream 2.0kb upstream 3995   true Chr17: 36490621-36494615 Glycine max
Glyma.17G216500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 36490621-36492620 Glycine max
Glyma.17G216500 2.0kb downstream 2.0kb downstream 3995   true Chr17: 36492621-36496615 Glycine max
Glyma.17G216500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 36494616-36496615 Glycine max
Glyma.17G216500 5.0kb upstream 5.0kb upstream 6995   true Chr17: 36487621-36494615 Glycine max
Glyma.17G216500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 36487621-36492620 Glycine max
Glyma.17G216500 5.0kb downstream 5.0kb downstream 6995   true Chr17: 36492621-36499615 Glycine max
Glyma.17G216500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 36494616-36499615 Glycine max
Glyma.17G216500 10.0kb upstream 10.0kb upstream 11995   true Chr17: 36482621-36494615 Glycine max
Glyma.17G216500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 36482621-36492620 Glycine max
Glyma.17G216500 10.0kb downstream 10.0kb downstream 11995   true Chr17: 36492621-36504615 Glycine max
Glyma.17G216500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 36494616-36504615 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040994 5273 Angiosperm View MSA
122297647 5265 Fabidae View MSA
124041955 5270 Rosid View MSA
123743333 5271 Pentapetalae View MSA
122793790 5272 Eudicot View MSA
121309781 5274 Embryophyte View MSA
123347442 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.9218 0.0 16.5493    
cufflinks 3.03685 0.0 9.22505    
cufflinks 9.83951 0.0 26.5311    
cufflinks 2.6533 0.0 8.2125    
cufflinks 3.16448 0.0 9.55237    
cufflinks 0.967395 0.0 3.38942    
cufflinks 0.111927 0.0 0.439087 Low Low
cufflinks 10.7437 0.0 28.8728    
cufflinks 4.61105 0.0 13.2522    
cufflinks 17.51     High High
cufflinks 0.742       Low
cufflinks 12.281     High High
cufflinks 1.217       Low
cufflinks 1.21       Low
cufflinks 2.502        
cufflinks 6.629        
cufflinks 14.243     High High
cufflinks 5.643        
cufflinks 3.035        
cufflinks 3.248        
cufflinks 0.732       Low
cufflinks 5.599        
cufflinks 6.418        
cufflinks 1.723        
cufflinks 4.368        
cufflinks 3.135        

0 Strain