Gene : Glyma.17G220700 G. max Wm82.a2.v1
Defline:  (1 of 12) PTHR24006:SF503 - TRAF-LIKE FAMILY PROTEIN-RELATED Genomic Order:  2207
Name:  ? Glyma.17G220700 Secondary Identifier:  ? PAC:30479014
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G220700 0.5kb upstream 0.5kb upstream 7808   true Chr17: 37265519-37273326 Glycine max
Glyma.17G220700 0.5kb upstream 0.5kb upstream 500   false Chr17: 37272827-37273326 Glycine max
Glyma.17G220700 0.5kb downstream 0.5kb downstream 7808   true Chr17: 37265019-37272826 Glycine max
Glyma.17G220700 0.5kb downstream 0.5kb downstream 500   false Chr17: 37265019-37265518 Glycine max
Glyma.17G220700 1.0kb upstream 1.0kb upstream 8308   true Chr17: 37265519-37273826 Glycine max
Glyma.17G220700 1.0kb upstream 1.0kb upstream 1000   false Chr17: 37272827-37273826 Glycine max
Glyma.17G220700 1.0kb downstream 1.0kb downstream 8308   true Chr17: 37264519-37272826 Glycine max
Glyma.17G220700 1.0kb downstream 1.0kb downstream 1000   false Chr17: 37264519-37265518 Glycine max
Glyma.17G220700 2.0kb upstream 2.0kb upstream 9308   true Chr17: 37265519-37274826 Glycine max
Glyma.17G220700 2.0kb upstream 2.0kb upstream 2000   false Chr17: 37272827-37274826 Glycine max
Glyma.17G220700 2.0kb downstream 2.0kb downstream 9308   true Chr17: 37263519-37272826 Glycine max
Glyma.17G220700 2.0kb downstream 2.0kb downstream 2000   false Chr17: 37263519-37265518 Glycine max
Glyma.17G220700 5.0kb upstream 5.0kb upstream 12308   true Chr17: 37265519-37277826 Glycine max
Glyma.17G220700 5.0kb upstream 5.0kb upstream 5000   false Chr17: 37272827-37277826 Glycine max
Glyma.17G220700 5.0kb downstream 5.0kb downstream 12308   true Chr17: 37260519-37272826 Glycine max
Glyma.17G220700 5.0kb downstream 5.0kb downstream 5000   false Chr17: 37260519-37265518 Glycine max
Glyma.17G220700 10.0kb upstream 10.0kb upstream 17308   true Chr17: 37265519-37282826 Glycine max
Glyma.17G220700 10.0kb upstream 10.0kb upstream 10000   false Chr17: 37272827-37282826 Glycine max
Glyma.17G220700 10.0kb downstream 10.0kb downstream 17308   true Chr17: 37255519-37272826 Glycine max
Glyma.17G220700 10.0kb downstream 10.0kb downstream 10000   false Chr17: 37255519-37265518 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312003 5265 Fabidae View MSA
124069619 5270 Rosid View MSA
123738264 5271 Pentapetalae View MSA
122797340 5272 Eudicot View MSA
122048060 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.96923 0.0 13.197    
cufflinks 4.13091 0.0 13.6523    
cufflinks 5.10579 0.0 18.5954   High
cufflinks 3.61178 0.0 12.2886    
cufflinks 3.777 0.0 12.6995    
cufflinks 3.74043 0.0 12.5834    
cufflinks 3.73155 0.0 12.5994    
cufflinks 3.19945 0.0 11.2244   Low
cufflinks 3.58083 0.0 14.185    
cufflinks 0.768        
cufflinks 0.776        
cufflinks 1.449       High
cufflinks 0.943        
cufflinks 1.218        
cufflinks 0.679       Low
cufflinks 1.115        
cufflinks 0.523       Low
cufflinks 1.575       High
cufflinks 1.331        
cufflinks 1.191        
cufflinks 0.607       Low
cufflinks 1.228        
cufflinks 1.118        
cufflinks 0.84        
cufflinks 1.101        
cufflinks 0.625       Low

0 Strain