Gene : Glyma.17G213600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR12294//PTHR12294:SF12 - EF HAND DOMAIN FAMILY A1,A2-RELATED Genomic Order:  2136
Name:  ? Glyma.17G213600 Secondary Identifier:  ? PAC:30479612
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G213600 0.5kb upstream 0.5kb upstream 6430   true Chr17: 35740625-35747054 Glycine max
Glyma.17G213600 0.5kb upstream 0.5kb upstream 500   false Chr17: 35746555-35747054 Glycine max
Glyma.17G213600 0.5kb downstream 0.5kb downstream 6430   true Chr17: 35740125-35746554 Glycine max
Glyma.17G213600 0.5kb downstream 0.5kb downstream 500   false Chr17: 35740125-35740624 Glycine max
Glyma.17G213600 1.0kb upstream 1.0kb upstream 6930   true Chr17: 35740625-35747554 Glycine max
Glyma.17G213600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 35746555-35747554 Glycine max
Glyma.17G213600 1.0kb downstream 1.0kb downstream 6930   true Chr17: 35739625-35746554 Glycine max
Glyma.17G213600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 35739625-35740624 Glycine max
Glyma.17G213600 2.0kb upstream 2.0kb upstream 7930   true Chr17: 35740625-35748554 Glycine max
Glyma.17G213600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 35746555-35748554 Glycine max
Glyma.17G213600 2.0kb downstream 2.0kb downstream 7930   true Chr17: 35738625-35746554 Glycine max
Glyma.17G213600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 35738625-35740624 Glycine max
Glyma.17G213600 5.0kb upstream 5.0kb upstream 10930   true Chr17: 35740625-35751554 Glycine max
Glyma.17G213600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 35746555-35751554 Glycine max
Glyma.17G213600 5.0kb downstream 5.0kb downstream 10930   true Chr17: 35735625-35746554 Glycine max
Glyma.17G213600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 35735625-35740624 Glycine max
Glyma.17G213600 10.0kb upstream 10.0kb upstream 15930   true Chr17: 35740625-35756554 Glycine max
Glyma.17G213600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 35746555-35756554 Glycine max
Glyma.17G213600 10.0kb downstream 10.0kb downstream 15930   true Chr17: 35730625-35746554 Glycine max
Glyma.17G213600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 35730625-35740624 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303624 5265 Fabidae View MSA
124073183 5270 Rosid View MSA
123742641 5271 Pentapetalae View MSA
122790177 5272 Eudicot View MSA
122041646 5273 Angiosperm View MSA
121347886 5274 Embryophyte View MSA
123424828 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.0539 0.0 74.1718   High
cufflinks 6.1688 0.0 31.1508   Low
cufflinks 8.8045 0.0 42.4712    
cufflinks 8.86533 0.0 42.7743    
cufflinks 10.3007 0.0 45.6857    
cufflinks 9.11721 0.0 40.7361    
cufflinks 10.0991 0.0 47.7666    
cufflinks 9.03226 0.0 44.2929    
cufflinks 12.6287 0.0 57.4467    
cufflinks 0.841        
cufflinks 5.817     High High
cufflinks 1.068        
cufflinks 0.979        
cufflinks 1.138        
cufflinks 6.351     High High
cufflinks 0.903        
cufflinks 3.726        
cufflinks 1.117        
cufflinks 1.046        
cufflinks 0.844        
cufflinks 6.718     High High
cufflinks 0.905        
cufflinks 0.881        
cufflinks 4.695       High
cufflinks 0.768        
cufflinks 6.971     High High

0 Strain