Gene : Glyma.17G255100 G. max Wm82.a2.v1
Defline:  (1 of 44) PF00643 - B-box zinc finger (zf-B_box) Genomic Order:  2551
Name:  ? Glyma.17G255100 Secondary Identifier:  ? PAC:30482387
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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G255100 0.5kb upstream 0.5kb upstream 2352   true Chr17: 40923058-40925409 Glycine max
Glyma.17G255100 0.5kb upstream 0.5kb upstream 500   false Chr17: 40923058-40923557 Glycine max
Glyma.17G255100 0.5kb downstream 0.5kb downstream 2352   true Chr17: 40923558-40925909 Glycine max
Glyma.17G255100 0.5kb downstream 0.5kb downstream 500   false Chr17: 40925410-40925909 Glycine max
Glyma.17G255100 1.0kb upstream 1.0kb upstream 2852   true Chr17: 40922558-40925409 Glycine max
Glyma.17G255100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 40922558-40923557 Glycine max
Glyma.17G255100 1.0kb downstream 1.0kb downstream 2852   true Chr17: 40923558-40926409 Glycine max
Glyma.17G255100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 40925410-40926409 Glycine max
Glyma.17G255100 2.0kb upstream 2.0kb upstream 3852   true Chr17: 40921558-40925409 Glycine max
Glyma.17G255100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 40921558-40923557 Glycine max
Glyma.17G255100 2.0kb downstream 2.0kb downstream 3852   true Chr17: 40923558-40927409 Glycine max
Glyma.17G255100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 40925410-40927409 Glycine max
Glyma.17G255100 5.0kb upstream 5.0kb upstream 6852   true Chr17: 40918558-40925409 Glycine max
Glyma.17G255100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 40918558-40923557 Glycine max
Glyma.17G255100 5.0kb downstream 5.0kb downstream 6852   true Chr17: 40923558-40930409 Glycine max
Glyma.17G255100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 40925410-40930409 Glycine max
Glyma.17G255100 10.0kb upstream 10.0kb upstream 11852   true Chr17: 40913558-40925409 Glycine max
Glyma.17G255100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 40913558-40923557 Glycine max
Glyma.17G255100 10.0kb downstream 10.0kb downstream 11852   true Chr17: 40923558-40935409 Glycine max
Glyma.17G255100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 40925410-40935409 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305493 5265 Fabidae View MSA
124065610 5270 Rosid View MSA
123744557 5271 Pentapetalae View MSA
122787512 5272 Eudicot View MSA
122049628 5273 Angiosperm View MSA
121350336 5274 Embryophyte View MSA
123427282 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.23278 0.0 18.5864    
cufflinks 12.2797 0.0 33.8664    
cufflinks 6.04762 0.0 18.1059    
cufflinks 2.39462 0.0 8.11967    
cufflinks 24.1052 0.0 64.3755 High  
cufflinks 30.9702 0.0 82.6667 High  
cufflinks 0.130682 0.0 0.520165 Low Low
cufflinks 9.29649 0.0 26.2465    
cufflinks 20.1848 0.0 54.1108 High  
cufflinks 2.34       Low
cufflinks 8.474     High High
cufflinks 4.089        
cufflinks 8.947     High High
cufflinks 5.471        
cufflinks 1.825       Low
cufflinks 4.676        
cufflinks 4.676        
cufflinks 3.099        
cufflinks 7.542     High High
cufflinks 3.67        
cufflinks 6.14     High  
cufflinks 3.402        
cufflinks 2.738       Low
cufflinks 7.146     High  
cufflinks 3.319        
cufflinks 8.106     High High

0 Strain