Gene : Glyma.17G256900 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31580:SF4 - FILAMENT-LIKE PLANT PROTEIN 4-RELATED Genomic Order:  2569
Name:  ? Glyma.17G256900 Secondary Identifier:  ? PAC:30479388
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G256900 0.5kb upstream 0.5kb upstream 6825   true Chr17: 41104357-41111181 Glycine max
Glyma.17G256900 0.5kb upstream 0.5kb upstream 500   false Chr17: 41104357-41104856 Glycine max
Glyma.17G256900 0.5kb downstream 0.5kb downstream 6825   true Chr17: 41104857-41111681 Glycine max
Glyma.17G256900 0.5kb downstream 0.5kb downstream 500   false Chr17: 41111182-41111681 Glycine max
Glyma.17G256900 1.0kb upstream 1.0kb upstream 7325   true Chr17: 41103857-41111181 Glycine max
Glyma.17G256900 1.0kb upstream 1.0kb upstream 1000   false Chr17: 41103857-41104856 Glycine max
Glyma.17G256900 1.0kb downstream 1.0kb downstream 7325   true Chr17: 41104857-41112181 Glycine max
Glyma.17G256900 1.0kb downstream 1.0kb downstream 1000   false Chr17: 41111182-41112181 Glycine max
Glyma.17G256900 2.0kb upstream 2.0kb upstream 8325   true Chr17: 41102857-41111181 Glycine max
Glyma.17G256900 2.0kb upstream 2.0kb upstream 2000   false Chr17: 41102857-41104856 Glycine max
Glyma.17G256900 2.0kb downstream 2.0kb downstream 8325   true Chr17: 41104857-41113181 Glycine max
Glyma.17G256900 2.0kb downstream 2.0kb downstream 2000   false Chr17: 41111182-41113181 Glycine max
Glyma.17G256900 5.0kb upstream 5.0kb upstream 11325   true Chr17: 41099857-41111181 Glycine max
Glyma.17G256900 5.0kb upstream 5.0kb upstream 5000   false Chr17: 41099857-41104856 Glycine max
Glyma.17G256900 5.0kb downstream 5.0kb downstream 11325   true Chr17: 41104857-41116181 Glycine max
Glyma.17G256900 5.0kb downstream 5.0kb downstream 5000   false Chr17: 41111182-41116181 Glycine max
Glyma.17G256900 10.0kb upstream 10.0kb upstream 16325   true Chr17: 41094857-41111181 Glycine max
Glyma.17G256900 10.0kb upstream 10.0kb upstream 10000   false Chr17: 41094857-41104856 Glycine max
Glyma.17G256900 10.0kb downstream 10.0kb downstream 16325   true Chr17: 41104857-41121181 Glycine max
Glyma.17G256900 10.0kb downstream 10.0kb downstream 10000   false Chr17: 41111182-41121181 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311025 5265 Fabidae View MSA
124071208 5270 Rosid View MSA
123744049 5271 Pentapetalae View MSA
122790238 5272 Eudicot View MSA
122044251 5273 Angiosperm View MSA
121351576 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.59229 0.0 11.1383   Low
cufflinks 7.7454 0.0 23.1905    
cufflinks 6.6248 0.0 19.573    
cufflinks 18.7674 0.0 64.2568    
cufflinks 9.11303 0.0 27.5292    
cufflinks 16.2582 0.0 53.6893    
cufflinks 19.0621 0.0 64.6689    
cufflinks 20.1067 0.0 70.3021    
cufflinks 15.3661 0.0 50.2377    
cufflinks 16.444     High High
cufflinks 2.501       Low
cufflinks 7.641     High  
cufflinks 12.766     High  
cufflinks 7.059     High  
cufflinks 14.221     High  
cufflinks 10.538     High  
cufflinks 3.493       Low
cufflinks 11.746     High  
cufflinks 6.637        
cufflinks 10.888     High  
cufflinks 4.305        
cufflinks 11.394     High  
cufflinks 19.938     High High
cufflinks 1.8       Low
cufflinks 9.433     High  
cufflinks 9.858     High  

0 Strain