Gene : Glyma.17G257500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR12300:SF26 - HVA22-LIKE PROTEIN G-RELATED Genomic Order:  2575
Name:  ? Glyma.17G257500 Secondary Identifier:  ? PAC:30481721
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G257500 0.5kb upstream 0.5kb upstream 3451   true Chr17: 41160841-41164291 Glycine max
Glyma.17G257500 0.5kb upstream 0.5kb upstream 500   false Chr17: 41160841-41161340 Glycine max
Glyma.17G257500 0.5kb downstream 0.5kb downstream 3451   true Chr17: 41161341-41164791 Glycine max
Glyma.17G257500 0.5kb downstream 0.5kb downstream 500   false Chr17: 41164292-41164791 Glycine max
Glyma.17G257500 1.0kb upstream 1.0kb upstream 3951   true Chr17: 41160341-41164291 Glycine max
Glyma.17G257500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 41160341-41161340 Glycine max
Glyma.17G257500 1.0kb downstream 1.0kb downstream 3951   true Chr17: 41161341-41165291 Glycine max
Glyma.17G257500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 41164292-41165291 Glycine max
Glyma.17G257500 2.0kb upstream 2.0kb upstream 4951   true Chr17: 41159341-41164291 Glycine max
Glyma.17G257500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 41159341-41161340 Glycine max
Glyma.17G257500 2.0kb downstream 2.0kb downstream 4951   true Chr17: 41161341-41166291 Glycine max
Glyma.17G257500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 41164292-41166291 Glycine max
Glyma.17G257500 5.0kb upstream 5.0kb upstream 7951   true Chr17: 41156341-41164291 Glycine max
Glyma.17G257500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 41156341-41161340 Glycine max
Glyma.17G257500 5.0kb downstream 5.0kb downstream 7951   true Chr17: 41161341-41169291 Glycine max
Glyma.17G257500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 41164292-41169291 Glycine max
Glyma.17G257500 10.0kb upstream 10.0kb upstream 12951   true Chr17: 41151341-41164291 Glycine max
Glyma.17G257500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 41151341-41161340 Glycine max
Glyma.17G257500 10.0kb downstream 10.0kb downstream 12951   true Chr17: 41161341-41174291 Glycine max
Glyma.17G257500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 41164292-41174291 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311541 5265 Fabidae View MSA
124068207 5270 Rosid View MSA
123753523 5271 Pentapetalae View MSA
122794920 5272 Eudicot View MSA
122050664 5273 Angiosperm View MSA
121348530 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.64181 0.0 5.56364   Low
cufflinks 7.18546 0.0 20.0564    
cufflinks 1.53964 0.0 5.24168   Low
cufflinks 17.5061 0.0 46.7111   High
cufflinks 8.99416 0.0 24.6544    
cufflinks 2.89324 0.0 9.08041    
cufflinks 8.95221 0.0 24.5863    
cufflinks 19.788 0.0 52.8051   High
cufflinks 6.4952 0.0 18.3051    
cufflinks 7.97     High High
cufflinks 0.131       Low
cufflinks 2.546        
cufflinks 3.19        
cufflinks 4.337        
cufflinks 1.407        
cufflinks 4.519        
cufflinks 0.549        
cufflinks 5.101        
cufflinks 4.633        
cufflinks 3.924        
cufflinks 0.372       Low
cufflinks 4.453        
cufflinks 4.397        
cufflinks 0.162       Low
cufflinks 4.103        
cufflinks 0.374       Low

0 Strain