Gene : Glyma.17G258200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR23201:SF2 - GIBBERELLIN-REGULATED PROTEIN 1-RELATED Genomic Order:  2582
Name:  ? Glyma.17G258200 Secondary Identifier:  ? PAC:30480894
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G258200 0.5kb upstream 0.5kb upstream 1516   true Chr17: 41222782-41224297 Glycine max
Glyma.17G258200 0.5kb upstream 0.5kb upstream 500   false Chr17: 41223798-41224297 Glycine max
Glyma.17G258200 0.5kb downstream 0.5kb downstream 1516   true Chr17: 41222282-41223797 Glycine max
Glyma.17G258200 0.5kb downstream 0.5kb downstream 500   false Chr17: 41222282-41222781 Glycine max
Glyma.17G258200 1.0kb upstream 1.0kb upstream 2016   true Chr17: 41222782-41224797 Glycine max
Glyma.17G258200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 41223798-41224797 Glycine max
Glyma.17G258200 1.0kb downstream 1.0kb downstream 2016   true Chr17: 41221782-41223797 Glycine max
Glyma.17G258200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 41221782-41222781 Glycine max
Glyma.17G258200 2.0kb upstream 2.0kb upstream 3016   true Chr17: 41222782-41225797 Glycine max
Glyma.17G258200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 41223798-41225797 Glycine max
Glyma.17G258200 2.0kb downstream 2.0kb downstream 3016   true Chr17: 41220782-41223797 Glycine max
Glyma.17G258200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 41220782-41222781 Glycine max
Glyma.17G258200 5.0kb upstream 5.0kb upstream 6016   true Chr17: 41222782-41228797 Glycine max
Glyma.17G258200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 41223798-41228797 Glycine max
Glyma.17G258200 5.0kb downstream 5.0kb downstream 6016   true Chr17: 41217782-41223797 Glycine max
Glyma.17G258200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 41217782-41222781 Glycine max
Glyma.17G258200 10.0kb upstream 10.0kb upstream 11016   true Chr17: 41222782-41233797 Glycine max
Glyma.17G258200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 41223798-41233797 Glycine max
Glyma.17G258200 10.0kb downstream 10.0kb downstream 11016   true Chr17: 41212782-41223797 Glycine max
Glyma.17G258200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 41212782-41222781 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313461 5265 Fabidae View MSA
124073806 5270 Rosid View MSA
123751873 5271 Pentapetalae View MSA
122795637 5272 Eudicot View MSA
122051034 5273 Angiosperm View MSA
121312257 5274 Embryophyte View MSA
123349447 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1441.81 0.0 14903.5 High High
cufflinks 1.31338 0.0 6.39763   Low
cufflinks 864.065 0.0 6164.43 High High
cufflinks 143.325 0.0 538.291 High  
cufflinks 31.9696 0.0 100.094 High  
cufflinks 14.8088 0.0 54.8363    
cufflinks 132.179 0.0 495.691 High  
cufflinks 15.2745 0.0 56.0928    
cufflinks 58.6661 0.0 205.058 High  
cufflinks 0.716       Low
cufflinks 8.11     High  
cufflinks 196.703     High High
cufflinks 39.158     High High
cufflinks 3.665        
cufflinks 18.748     High  
cufflinks 13.355     High  
cufflinks 9.508     High  
cufflinks 29.335     High  
cufflinks 0.212       Low
cufflinks 7.187     High  
cufflinks 7.103     High  
cufflinks 5.948        
cufflinks 0.693       Low
cufflinks 4.295        
cufflinks 11.273     High  
cufflinks 6.125        

0 Strain