Gene : Glyma.17G258400 G. max Wm82.a2.v1
Defline:  (1 of 30) PF05003 - Protein of unknown function (DUF668) (DUF668) Genomic Order:  2584
Name:  ? Glyma.17G258400 Secondary Identifier:  ? PAC:30481668
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G258400 0.5kb upstream 0.5kb upstream 5747   true Chr17: 41248479-41254225 Glycine max
Glyma.17G258400 0.5kb upstream 0.5kb upstream 500   false Chr17: 41248479-41248978 Glycine max
Glyma.17G258400 0.5kb downstream 0.5kb downstream 5747   true Chr17: 41248979-41254725 Glycine max
Glyma.17G258400 0.5kb downstream 0.5kb downstream 500   false Chr17: 41254226-41254725 Glycine max
Glyma.17G258400 1.0kb upstream 1.0kb upstream 6247   true Chr17: 41247979-41254225 Glycine max
Glyma.17G258400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 41247979-41248978 Glycine max
Glyma.17G258400 1.0kb downstream 1.0kb downstream 6247   true Chr17: 41248979-41255225 Glycine max
Glyma.17G258400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 41254226-41255225 Glycine max
Glyma.17G258400 2.0kb upstream 2.0kb upstream 7247   true Chr17: 41246979-41254225 Glycine max
Glyma.17G258400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 41246979-41248978 Glycine max
Glyma.17G258400 2.0kb downstream 2.0kb downstream 7247   true Chr17: 41248979-41256225 Glycine max
Glyma.17G258400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 41254226-41256225 Glycine max
Glyma.17G258400 5.0kb upstream 5.0kb upstream 10247   true Chr17: 41243979-41254225 Glycine max
Glyma.17G258400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 41243979-41248978 Glycine max
Glyma.17G258400 5.0kb downstream 5.0kb downstream 10247   true Chr17: 41248979-41259225 Glycine max
Glyma.17G258400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 41254226-41259225 Glycine max
Glyma.17G258400 10.0kb upstream 10.0kb upstream 15247   true Chr17: 41238979-41254225 Glycine max
Glyma.17G258400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 41238979-41248978 Glycine max
Glyma.17G258400 10.0kb downstream 10.0kb downstream 15247   true Chr17: 41248979-41264225 Glycine max
Glyma.17G258400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 41254226-41264225 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026584 5273 Angiosperm View MSA
122296258 5265 Fabidae View MSA
124061496 5270 Rosid View MSA
123736694 5271 Pentapetalae View MSA
122794178 5272 Eudicot View MSA
121296402 5274 Embryophyte View MSA
123334571 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.5968 0.0 33.621   High
cufflinks 0.0446103 0.0 0.180124 Low Low
cufflinks 3.28682 0.0 9.64099    
cufflinks 0.0442745 0.0 0.178702 Low Low
cufflinks 2.05427 0.0 6.48569    
cufflinks 24.8327 0.0 67.5087 High High
cufflinks 0.265984 0.0 1.00081    
cufflinks 0.765748 0.0 2.70033    
cufflinks 5.80605 0.0 16.0525    
cufflinks 0.176        
cufflinks 6.343     High High
cufflinks 0.835        
cufflinks 3.612        
cufflinks 0.563        
cufflinks 1.309        
cufflinks 0.031     Low Low
cufflinks 9.162     High High
cufflinks 0.455        
cufflinks 0.108        
cufflinks 0.027     Low Low
cufflinks 5.431       High
cufflinks 0.113        
cufflinks 0.088     Low  
cufflinks 15.212     High High
cufflinks 0.028     Low Low
cufflinks 4.722        

0 Strain