Gene : Glyma.17G258700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11528:SF45 - ENDOPLASMIN HOMOLOG Genomic Order:  2587
Name:  ? Glyma.17G258700 Secondary Identifier:  ? PAC:30481828
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G258700 0.5kb upstream 0.5kb upstream 5357   true Chr17: 41280124-41285480 Glycine max
Glyma.17G258700 0.5kb upstream 0.5kb upstream 500   false Chr17: 41284981-41285480 Glycine max
Glyma.17G258700 0.5kb downstream 0.5kb downstream 5357   true Chr17: 41279624-41284980 Glycine max
Glyma.17G258700 0.5kb downstream 0.5kb downstream 500   false Chr17: 41279624-41280123 Glycine max
Glyma.17G258700 1.0kb upstream 1.0kb upstream 5857   true Chr17: 41280124-41285980 Glycine max
Glyma.17G258700 1.0kb upstream 1.0kb upstream 1000   false Chr17: 41284981-41285980 Glycine max
Glyma.17G258700 1.0kb downstream 1.0kb downstream 5857   true Chr17: 41279124-41284980 Glycine max
Glyma.17G258700 1.0kb downstream 1.0kb downstream 1000   false Chr17: 41279124-41280123 Glycine max
Glyma.17G258700 2.0kb upstream 2.0kb upstream 6857   true Chr17: 41280124-41286980 Glycine max
Glyma.17G258700 2.0kb upstream 2.0kb upstream 2000   false Chr17: 41284981-41286980 Glycine max
Glyma.17G258700 2.0kb downstream 2.0kb downstream 6857   true Chr17: 41278124-41284980 Glycine max
Glyma.17G258700 2.0kb downstream 2.0kb downstream 2000   false Chr17: 41278124-41280123 Glycine max
Glyma.17G258700 5.0kb upstream 5.0kb upstream 9857   true Chr17: 41280124-41289980 Glycine max
Glyma.17G258700 5.0kb upstream 5.0kb upstream 5000   false Chr17: 41284981-41289980 Glycine max
Glyma.17G258700 5.0kb downstream 5.0kb downstream 9857   true Chr17: 41275124-41284980 Glycine max
Glyma.17G258700 5.0kb downstream 5.0kb downstream 5000   false Chr17: 41275124-41280123 Glycine max
Glyma.17G258700 10.0kb upstream 10.0kb upstream 14857   true Chr17: 41280124-41294980 Glycine max
Glyma.17G258700 10.0kb upstream 10.0kb upstream 10000   false Chr17: 41284981-41294980 Glycine max
Glyma.17G258700 10.0kb downstream 10.0kb downstream 14857   true Chr17: 41270124-41284980 Glycine max
Glyma.17G258700 10.0kb downstream 10.0kb downstream 10000   false Chr17: 41270124-41280123 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303162 5265 Fabidae View MSA
124066321 5270 Rosid View MSA
123749094 5271 Pentapetalae View MSA
122793855 5272 Eudicot View MSA
122042425 5273 Angiosperm View MSA
121346567 5274 Embryophyte View MSA
123424830 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 115.789 0.0 731.902 High  
cufflinks 73.9324 0.0 362.691 High  
cufflinks 40.7545 0.0 157.179 High Low
cufflinks 145.36 0.0 1085.85 High  
cufflinks 125.412 0.0 830.088 High  
cufflinks 96.0054 0.0 539.054 High  
cufflinks 143.73 0.0 1035.89 High  
cufflinks 67.7079 0.0 320.156 High  
cufflinks 146.673 0.0 1090.92 High  
cufflinks 35.337     High  
cufflinks 3.5       Low
cufflinks 40.65     High  
cufflinks 64.788     High High
cufflinks 82.22     High High
cufflinks 6.221     High  
cufflinks 13.649     High  
cufflinks 14.908     High  
cufflinks 46.376     High High
cufflinks 32.062     High  
cufflinks 8.58     High  
cufflinks 4.406       Low
cufflinks 14.651     High  
cufflinks 19.582     High  
cufflinks 4.687       Low
cufflinks 9.39     High  
cufflinks 7.142     High  

0 Strain