Gene : Glyma.17G259200 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11099 - VACUOLAR SORTING PROTEIN 35 Genomic Order:  2592
Name:  ? Glyma.17G259200 Secondary Identifier:  ? PAC:30480527
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G259200 0.5kb upstream 0.5kb upstream 9330   true Chr17: 41334188-41343517 Glycine max
Glyma.17G259200 0.5kb upstream 0.5kb upstream 500   false Chr17: 41343018-41343517 Glycine max
Glyma.17G259200 0.5kb downstream 0.5kb downstream 9330   true Chr17: 41333688-41343017 Glycine max
Glyma.17G259200 0.5kb downstream 0.5kb downstream 500   false Chr17: 41333688-41334187 Glycine max
Glyma.17G259200 1.0kb upstream 1.0kb upstream 9830   true Chr17: 41334188-41344017 Glycine max
Glyma.17G259200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 41343018-41344017 Glycine max
Glyma.17G259200 1.0kb downstream 1.0kb downstream 9830   true Chr17: 41333188-41343017 Glycine max
Glyma.17G259200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 41333188-41334187 Glycine max
Glyma.17G259200 2.0kb upstream 2.0kb upstream 10830   true Chr17: 41334188-41345017 Glycine max
Glyma.17G259200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 41343018-41345017 Glycine max
Glyma.17G259200 2.0kb downstream 2.0kb downstream 10830   true Chr17: 41332188-41343017 Glycine max
Glyma.17G259200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 41332188-41334187 Glycine max
Glyma.17G259200 5.0kb upstream 5.0kb upstream 13830   true Chr17: 41334188-41348017 Glycine max
Glyma.17G259200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 41343018-41348017 Glycine max
Glyma.17G259200 5.0kb downstream 5.0kb downstream 13830   true Chr17: 41329188-41343017 Glycine max
Glyma.17G259200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 41329188-41334187 Glycine max
Glyma.17G259200 10.0kb upstream 10.0kb upstream 18830   true Chr17: 41334188-41353017 Glycine max
Glyma.17G259200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 41343018-41353017 Glycine max
Glyma.17G259200 10.0kb downstream 10.0kb downstream 18830   true Chr17: 41324188-41343017 Glycine max
Glyma.17G259200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 41324188-41334187 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312645 5265 Fabidae View MSA
124070989 5270 Rosid View MSA
123744286 5271 Pentapetalae View MSA
122786661 5272 Eudicot View MSA
122044780 5273 Angiosperm View MSA
121345566 5274 Embryophyte View MSA
123426785 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.71131 0.0 30.5415    
cufflinks 7.3345 0.0 26.4622   Low
cufflinks 11.3843 0.0 40.0597   High
cufflinks 7.8596 0.0 27.976   Low
cufflinks 9.8493 0.0 34.6902    
cufflinks 11.1693 0.0 33.1272    
cufflinks 11.4636 0.0 33.9376   High
cufflinks 8.29717 0.0 29.3315    
cufflinks 10.1064 0.0 35.8448    
cufflinks 1.302        
cufflinks 1.305        
cufflinks 1.842        
cufflinks 1.873        
cufflinks 1.902        
cufflinks 2.178       High
cufflinks 1.516        
cufflinks 1.086       Low
cufflinks 2.109       High
cufflinks 1.709        
cufflinks 1.855        
cufflinks 1.225       Low
cufflinks 1.833        
cufflinks 1.385        
cufflinks 1.231       Low
cufflinks 1.8        
cufflinks 1.209       Low

0 Strain