Gene : Glyma.17G260400 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31867:SF4 - EXPANSIN-A11 Genomic Order:  2604
Name:  ? Glyma.17G260400 Secondary Identifier:  ? PAC:30480360
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G260400 0.5kb upstream 0.5kb upstream 2582   true Chr17: 41454315-41456896 Glycine max
Glyma.17G260400 0.5kb upstream 0.5kb upstream 500   false Chr17: 41456397-41456896 Glycine max
Glyma.17G260400 0.5kb downstream 0.5kb downstream 2582   true Chr17: 41453815-41456396 Glycine max
Glyma.17G260400 0.5kb downstream 0.5kb downstream 500   false Chr17: 41453815-41454314 Glycine max
Glyma.17G260400 1.0kb upstream 1.0kb upstream 3082   true Chr17: 41454315-41457396 Glycine max
Glyma.17G260400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 41456397-41457396 Glycine max
Glyma.17G260400 1.0kb downstream 1.0kb downstream 3082   true Chr17: 41453315-41456396 Glycine max
Glyma.17G260400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 41453315-41454314 Glycine max
Glyma.17G260400 2.0kb upstream 2.0kb upstream 4082   true Chr17: 41454315-41458396 Glycine max
Glyma.17G260400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 41456397-41458396 Glycine max
Glyma.17G260400 2.0kb downstream 2.0kb downstream 4082   true Chr17: 41452315-41456396 Glycine max
Glyma.17G260400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 41452315-41454314 Glycine max
Glyma.17G260400 5.0kb upstream 5.0kb upstream 7082   true Chr17: 41454315-41461396 Glycine max
Glyma.17G260400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 41456397-41461396 Glycine max
Glyma.17G260400 5.0kb downstream 5.0kb downstream 7082   true Chr17: 41449315-41456396 Glycine max
Glyma.17G260400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 41449315-41454314 Glycine max
Glyma.17G260400 10.0kb upstream 10.0kb upstream 12082   true Chr17: 41454315-41466396 Glycine max
Glyma.17G260400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 41456397-41466396 Glycine max
Glyma.17G260400 10.0kb downstream 10.0kb downstream 12082   true Chr17: 41444315-41456396 Glycine max
Glyma.17G260400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 41444315-41454314 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300558 5265 Fabidae View MSA
124073729 5270 Rosid View MSA
123747449 5271 Pentapetalae View MSA
122792486 5272 Eudicot View MSA
122042176 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121348621 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.158387 0.0 0.624817 Low Low
cufflinks 3.54152 0.0 11.3259    
cufflinks 9.09317 0.0 25.5525    
cufflinks 0.67728 0.0 2.50971    
cufflinks 43.7577 0.0 118.423 High High
cufflinks 16.9001 0.0 45.4802    
cufflinks 1.16092 0.0 4.16605    
cufflinks 0.963838 0.0 3.50233    
cufflinks 13.991 0.0 38.0428    
cufflinks 13.597     High  
cufflinks 1.013       Low
cufflinks 12.794     High  
cufflinks 51.158     High High
cufflinks 80.043     High High
cufflinks 0.278       Low
cufflinks 1.841        
cufflinks 3.841        
cufflinks 72.271     High High
cufflinks 10.349     High  
cufflinks 1.19        
cufflinks 3.948        
cufflinks 1.3        
cufflinks 13.023     High  
cufflinks 2.052        
cufflinks 1.409        
cufflinks 6.723     High  

0 Strain