Gene : Glyma.17G260600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR13516//PTHR13516:SF9 - RIBONUCLEASE P SUBUNIT P25 Genomic Order:  2606
Name:  ? Glyma.17G260600 Secondary Identifier:  ? PAC:30480586
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G260600 0.5kb upstream 0.5kb upstream 2484   true Chr17: 41463996-41466479 Glycine max
Glyma.17G260600 0.5kb upstream 0.5kb upstream 500   false Chr17: 41465980-41466479 Glycine max
Glyma.17G260600 0.5kb downstream 0.5kb downstream 2484   true Chr17: 41463496-41465979 Glycine max
Glyma.17G260600 0.5kb downstream 0.5kb downstream 500   false Chr17: 41463496-41463995 Glycine max
Glyma.17G260600 1.0kb upstream 1.0kb upstream 2984   true Chr17: 41463996-41466979 Glycine max
Glyma.17G260600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 41465980-41466979 Glycine max
Glyma.17G260600 1.0kb downstream 1.0kb downstream 2984   true Chr17: 41462996-41465979 Glycine max
Glyma.17G260600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 41462996-41463995 Glycine max
Glyma.17G260600 2.0kb upstream 2.0kb upstream 3984   true Chr17: 41463996-41467979 Glycine max
Glyma.17G260600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 41465980-41467979 Glycine max
Glyma.17G260600 2.0kb downstream 2.0kb downstream 3984   true Chr17: 41461996-41465979 Glycine max
Glyma.17G260600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 41461996-41463995 Glycine max
Glyma.17G260600 5.0kb upstream 5.0kb upstream 6984   true Chr17: 41463996-41470979 Glycine max
Glyma.17G260600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 41465980-41470979 Glycine max
Glyma.17G260600 5.0kb downstream 5.0kb downstream 6984   true Chr17: 41458996-41465979 Glycine max
Glyma.17G260600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 41458996-41463995 Glycine max
Glyma.17G260600 10.0kb upstream 10.0kb upstream 11984   true Chr17: 41463996-41475979 Glycine max
Glyma.17G260600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 41465980-41475979 Glycine max
Glyma.17G260600 10.0kb downstream 10.0kb downstream 11984   true Chr17: 41453996-41465979 Glycine max
Glyma.17G260600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 41453996-41463995 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780778 5273 Angiosperm View MSA
122244214 5265 Fabidae Singleton cluster - no MSA
124038379 5270 Rosid View MSA
123747805 5271 Pentapetalae View MSA
122772316 5272 Eudicot View MSA
121052380 5274 Embryophyte View MSA
123428727 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.5826 0.0 61.5641 High  
cufflinks 34.1514 0.0 91.4295 High  
cufflinks 18.1124 0.0 50.1592   Low
cufflinks 18.4154 0.0 50.9802   Low
cufflinks 45.774 0.0 122.143 High High
cufflinks 34.7373 0.0 92.874 High  
cufflinks 58.4324 0.0 156.536 High High
cufflinks 28.1418 0.0 75.8346 High  
cufflinks 31.5152 0.0 84.5393 High  
cufflinks 6.686       Low
cufflinks 14.161     High  
cufflinks 7.328     High  
cufflinks 17.223     High High
cufflinks 28.503     High High
cufflinks 7.531     High  
cufflinks 10.247     High  
cufflinks 7.631     High  
cufflinks 10.004     High  
cufflinks 10.875     High  
cufflinks 8.089     High  
cufflinks 20.261     High High
cufflinks 8.659     High  
cufflinks 13.483     High  
cufflinks 8.995     High  
cufflinks 9.706     High  
cufflinks 10.043     High  

0 Strain