Gene : Glyma.17G261200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13675:SF0 - LYR MOTIF-CONTAINING PROTEIN 2 Genomic Order:  2612
Name:  ? Glyma.17G261200 Secondary Identifier:  ? PAC:30479432
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G261200 0.5kb upstream 0.5kb upstream 4814   true Chr17: 41487622-41492435 Glycine max
Glyma.17G261200 0.5kb upstream 0.5kb upstream 500   false Chr17: 41491936-41492435 Glycine max
Glyma.17G261200 0.5kb downstream 0.5kb downstream 4814   true Chr17: 41487122-41491935 Glycine max
Glyma.17G261200 0.5kb downstream 0.5kb downstream 500   false Chr17: 41487122-41487621 Glycine max
Glyma.17G261200 1.0kb upstream 1.0kb upstream 5314   true Chr17: 41487622-41492935 Glycine max
Glyma.17G261200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 41491936-41492935 Glycine max
Glyma.17G261200 1.0kb downstream 1.0kb downstream 5314   true Chr17: 41486622-41491935 Glycine max
Glyma.17G261200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 41486622-41487621 Glycine max
Glyma.17G261200 2.0kb upstream 2.0kb upstream 6314   true Chr17: 41487622-41493935 Glycine max
Glyma.17G261200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 41491936-41493935 Glycine max
Glyma.17G261200 2.0kb downstream 2.0kb downstream 6314   true Chr17: 41485622-41491935 Glycine max
Glyma.17G261200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 41485622-41487621 Glycine max
Glyma.17G261200 5.0kb upstream 5.0kb upstream 9314   true Chr17: 41487622-41496935 Glycine max
Glyma.17G261200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 41491936-41496935 Glycine max
Glyma.17G261200 5.0kb downstream 5.0kb downstream 9314   true Chr17: 41482622-41491935 Glycine max
Glyma.17G261200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 41482622-41487621 Glycine max
Glyma.17G261200 10.0kb upstream 10.0kb upstream 14314   true Chr17: 41487622-41501935 Glycine max
Glyma.17G261200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 41491936-41501935 Glycine max
Glyma.17G261200 10.0kb downstream 10.0kb downstream 14314   true Chr17: 41477622-41491935 Glycine max
Glyma.17G261200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 41477622-41487621 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028538 5273 Angiosperm View MSA
122312190 5265 Fabidae View MSA
124050217 5270 Rosid View MSA
123749914 5271 Pentapetalae View MSA
122789419 5272 Eudicot View MSA
121346183 5274 Embryophyte View MSA
123425474 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.56916 0.0 12.1137    
cufflinks 1.95624 0.0 14.257    
cufflinks 2.92061 0.0 19.9552   High
cufflinks 1.11176 0.0 12.2211   Low
cufflinks 1.67649 0.0 13.1011    
cufflinks 1.6697 0.0 7.5485    
cufflinks 1.03934 0.0 12.2003   Low
cufflinks 1.09026 0.0 5.9827   Low
cufflinks 1.67311 0.0 14.5951    
cufflinks 0.518        
cufflinks 0.544        
cufflinks 1.372       High
cufflinks 1.414       High
cufflinks 1.86       High
cufflinks 0.284       Low
cufflinks 0.499        
cufflinks 0.497        
cufflinks 0.907        
cufflinks 0.743        
cufflinks 0.821        
cufflinks 0.559        
cufflinks 0.634        
cufflinks 0.761        
cufflinks 0.872        
cufflinks 0.712        
cufflinks 0.312       Low

0 Strain