Gene : Glyma.17G248800 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG2356 - Transcriptional activator, adenine-specific DNA methyltransferase Genomic Order:  2488
Name:  ? Glyma.17G248800 Secondary Identifier:  ? PAC:30480477
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G248800 0.5kb upstream 0.5kb upstream 4370   true Chr17: 40409725-40414094 Glycine max
Glyma.17G248800 0.5kb upstream 0.5kb upstream 500   false Chr17: 40409725-40410224 Glycine max
Glyma.17G248800 0.5kb downstream 0.5kb downstream 4370   true Chr17: 40410225-40414594 Glycine max
Glyma.17G248800 0.5kb downstream 0.5kb downstream 500   false Chr17: 40414095-40414594 Glycine max
Glyma.17G248800 1.0kb upstream 1.0kb upstream 4870   true Chr17: 40409225-40414094 Glycine max
Glyma.17G248800 1.0kb upstream 1.0kb upstream 1000   false Chr17: 40409225-40410224 Glycine max
Glyma.17G248800 1.0kb downstream 1.0kb downstream 4870   true Chr17: 40410225-40415094 Glycine max
Glyma.17G248800 1.0kb downstream 1.0kb downstream 1000   false Chr17: 40414095-40415094 Glycine max
Glyma.17G248800 2.0kb upstream 2.0kb upstream 5870   true Chr17: 40408225-40414094 Glycine max
Glyma.17G248800 2.0kb upstream 2.0kb upstream 2000   false Chr17: 40408225-40410224 Glycine max
Glyma.17G248800 2.0kb downstream 2.0kb downstream 5870   true Chr17: 40410225-40416094 Glycine max
Glyma.17G248800 2.0kb downstream 2.0kb downstream 2000   false Chr17: 40414095-40416094 Glycine max
Glyma.17G248800 5.0kb upstream 5.0kb upstream 8870   true Chr17: 40405225-40414094 Glycine max
Glyma.17G248800 5.0kb upstream 5.0kb upstream 5000   false Chr17: 40405225-40410224 Glycine max
Glyma.17G248800 5.0kb downstream 5.0kb downstream 8870   true Chr17: 40410225-40419094 Glycine max
Glyma.17G248800 5.0kb downstream 5.0kb downstream 5000   false Chr17: 40414095-40419094 Glycine max
Glyma.17G248800 10.0kb upstream 10.0kb upstream 13870   true Chr17: 40400225-40414094 Glycine max
Glyma.17G248800 10.0kb upstream 10.0kb upstream 10000   false Chr17: 40400225-40410224 Glycine max
Glyma.17G248800 10.0kb downstream 10.0kb downstream 13870   true Chr17: 40410225-40424094 Glycine max
Glyma.17G248800 10.0kb downstream 10.0kb downstream 10000   false Chr17: 40414095-40424094 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041346 5273 Angiosperm View MSA
122308868 5265 Fabidae View MSA
124068537 5270 Rosid View MSA
123738217 5271 Pentapetalae View MSA
122788496 5272 Eudicot View MSA
121344904 5274 Embryophyte View MSA
123380126 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.266101 0.0 1.04212    
cufflinks 0.164674 0.0 0.656175 Low Low
cufflinks 0.245938 0.0 0.966063    
cufflinks 0.427135 0.0 1.63888   High
cufflinks 0.200168 0.0 0.791306 Low  
cufflinks 0.356476 0.0 1.37917    
cufflinks 0.311457 0.0 1.21141    
cufflinks 0.117568 0.0 0.474276 Low Low
cufflinks 0.377724 0.0 1.45682    
cufflinks 0.301       Low
cufflinks 0.786       High
cufflinks 0.474        
cufflinks 0.548        
cufflinks 0.527        
cufflinks 0.697        
cufflinks 0.556        
cufflinks 0.5        
cufflinks 0.493        
cufflinks 0.676        
cufflinks 0.754       High
cufflinks 0.445        
cufflinks 0.684        
cufflinks 0.541        
cufflinks 0.597        
cufflinks 0.742       High
cufflinks 0.484        

0 Strain