Gene : Glyma.17G249100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12320:SF1 - PROTEIN PHOSPHATASE PTC7 HOMOLOG Genomic Order:  2491
Name:  ? Glyma.17G249100 Secondary Identifier:  ? PAC:30481464
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G249100 0.5kb upstream 0.5kb upstream 6423   true Chr17: 40425540-40431962 Glycine max
Glyma.17G249100 0.5kb upstream 0.5kb upstream 500   false Chr17: 40425540-40426039 Glycine max
Glyma.17G249100 0.5kb downstream 0.5kb downstream 6423   true Chr17: 40426040-40432462 Glycine max
Glyma.17G249100 0.5kb downstream 0.5kb downstream 500   false Chr17: 40431963-40432462 Glycine max
Glyma.17G249100 1.0kb upstream 1.0kb upstream 6923   true Chr17: 40425040-40431962 Glycine max
Glyma.17G249100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 40425040-40426039 Glycine max
Glyma.17G249100 1.0kb downstream 1.0kb downstream 6923   true Chr17: 40426040-40432962 Glycine max
Glyma.17G249100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 40431963-40432962 Glycine max
Glyma.17G249100 2.0kb upstream 2.0kb upstream 7923   true Chr17: 40424040-40431962 Glycine max
Glyma.17G249100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 40424040-40426039 Glycine max
Glyma.17G249100 2.0kb downstream 2.0kb downstream 7923   true Chr17: 40426040-40433962 Glycine max
Glyma.17G249100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 40431963-40433962 Glycine max
Glyma.17G249100 5.0kb upstream 5.0kb upstream 10923   true Chr17: 40421040-40431962 Glycine max
Glyma.17G249100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 40421040-40426039 Glycine max
Glyma.17G249100 5.0kb downstream 5.0kb downstream 10923   true Chr17: 40426040-40436962 Glycine max
Glyma.17G249100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 40431963-40436962 Glycine max
Glyma.17G249100 10.0kb upstream 10.0kb upstream 15923   true Chr17: 40416040-40431962 Glycine max
Glyma.17G249100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 40416040-40426039 Glycine max
Glyma.17G249100 10.0kb downstream 10.0kb downstream 15923   true Chr17: 40426040-40441962 Glycine max
Glyma.17G249100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 40431963-40441962 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305578 5265 Fabidae View MSA
124069007 5270 Rosid View MSA
123743389 5271 Pentapetalae View MSA
122796886 5272 Eudicot View MSA
122043108 5273 Angiosperm View MSA
121351334 5274 Embryophyte View MSA
123428574 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.0483 0.0 40.148   High
cufflinks 10.7691 0.0 28.9226    
cufflinks 14.049 0.0 37.4926    
cufflinks 13.0381 0.0 34.8339    
cufflinks 9.73714 0.0 26.2519   Low
cufflinks 12.81 0.0 34.2276    
cufflinks 13.2513 0.0 35.4015    
cufflinks 11.9584 0.0 32.0091    
cufflinks 10.1703 0.0 27.3644   Low
cufflinks 3.09        
cufflinks 3.102        
cufflinks 4.569        
cufflinks 2.503       Low
cufflinks 2.261       Low
cufflinks 2.543       Low
cufflinks 4.569        
cufflinks 2.455       Low
cufflinks 4.06        
cufflinks 3.809        
cufflinks 5.103       High
cufflinks 2.922        
cufflinks 5.249       High
cufflinks 4.617        
cufflinks 3.551        
cufflinks 4.567        
cufflinks 2.707        

0 Strain