Gene : Glyma.17G250100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10174//PTHR10174:SF151 - RETINALDEHYDE BINDING PROTEIN-RELATED Genomic Order:  2501
Name:  ? Glyma.17G250100 Secondary Identifier:  ? PAC:30482148
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G250100 0.5kb upstream 0.5kb upstream 3399   true Chr17: 40510472-40513870 Glycine max
Glyma.17G250100 0.5kb upstream 0.5kb upstream 500   false Chr17: 40510472-40510971 Glycine max
Glyma.17G250100 0.5kb downstream 0.5kb downstream 3399   true Chr17: 40510972-40514370 Glycine max
Glyma.17G250100 0.5kb downstream 0.5kb downstream 500   false Chr17: 40513871-40514370 Glycine max
Glyma.17G250100 1.0kb upstream 1.0kb upstream 3899   true Chr17: 40509972-40513870 Glycine max
Glyma.17G250100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 40509972-40510971 Glycine max
Glyma.17G250100 1.0kb downstream 1.0kb downstream 3899   true Chr17: 40510972-40514870 Glycine max
Glyma.17G250100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 40513871-40514870 Glycine max
Glyma.17G250100 2.0kb upstream 2.0kb upstream 4899   true Chr17: 40508972-40513870 Glycine max
Glyma.17G250100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 40508972-40510971 Glycine max
Glyma.17G250100 2.0kb downstream 2.0kb downstream 4899   true Chr17: 40510972-40515870 Glycine max
Glyma.17G250100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 40513871-40515870 Glycine max
Glyma.17G250100 5.0kb upstream 5.0kb upstream 7899   true Chr17: 40505972-40513870 Glycine max
Glyma.17G250100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 40505972-40510971 Glycine max
Glyma.17G250100 5.0kb downstream 5.0kb downstream 7899   true Chr17: 40510972-40518870 Glycine max
Glyma.17G250100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 40513871-40518870 Glycine max
Glyma.17G250100 10.0kb upstream 10.0kb upstream 12899   true Chr17: 40500972-40513870 Glycine max
Glyma.17G250100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 40500972-40510971 Glycine max
Glyma.17G250100 10.0kb downstream 10.0kb downstream 12899   true Chr17: 40510972-40523870 Glycine max
Glyma.17G250100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 40513871-40523870 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308639 5265 Fabidae View MSA
124068737 5270 Rosid View MSA
123747971 5271 Pentapetalae View MSA
122789052 5272 Eudicot View MSA
122046588 5273 Angiosperm View MSA
121350309 5274 Embryophyte View MSA
123427540 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.94235 0.0 24.3205    
cufflinks 5.71125 0.0 20.3681   High
cufflinks 6.27109 0.0 35.8677   High
cufflinks 4.75722 0.0 20.5683    
cufflinks 0.973148 0.0 5.82306   Low
cufflinks 1.00752 0.0 9.21831   Low
cufflinks 2.16674 0.0 10.0475    
cufflinks 3.07539 0.0 14.8862    
cufflinks 2.35526 0.0 10.3944    
cufflinks 3.775        
cufflinks 0.305       Low
cufflinks 8.004     High High
cufflinks 0.916        
cufflinks 0.85        
cufflinks 0.618       Low
cufflinks 3.648        
cufflinks 2.238        
cufflinks 12.754     High High
cufflinks 7.098       High
cufflinks 5.254        
cufflinks 0.482       Low
cufflinks 5.809        
cufflinks 5.631        
cufflinks 0.672       Low
cufflinks 4.181        
cufflinks 1.473        

0 Strain