Gene : Glyma.17G251500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR16517:SF41 - TUBBY-LIKE F-BOX PROTEIN 6 Genomic Order:  2515
Name:  ? Glyma.17G251500 Secondary Identifier:  ? PAC:30480865
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G251500 0.5kb upstream 0.5kb upstream 4672   true Chr17: 40615440-40620111 Glycine max
Glyma.17G251500 0.5kb upstream 0.5kb upstream 500   false Chr17: 40619612-40620111 Glycine max
Glyma.17G251500 0.5kb downstream 0.5kb downstream 4672   true Chr17: 40614940-40619611 Glycine max
Glyma.17G251500 0.5kb downstream 0.5kb downstream 500   false Chr17: 40614940-40615439 Glycine max
Glyma.17G251500 1.0kb upstream 1.0kb upstream 5172   true Chr17: 40615440-40620611 Glycine max
Glyma.17G251500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 40619612-40620611 Glycine max
Glyma.17G251500 1.0kb downstream 1.0kb downstream 5172   true Chr17: 40614440-40619611 Glycine max
Glyma.17G251500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 40614440-40615439 Glycine max
Glyma.17G251500 2.0kb upstream 2.0kb upstream 6172   true Chr17: 40615440-40621611 Glycine max
Glyma.17G251500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 40619612-40621611 Glycine max
Glyma.17G251500 2.0kb downstream 2.0kb downstream 6172   true Chr17: 40613440-40619611 Glycine max
Glyma.17G251500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 40613440-40615439 Glycine max
Glyma.17G251500 5.0kb upstream 5.0kb upstream 9172   true Chr17: 40615440-40624611 Glycine max
Glyma.17G251500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 40619612-40624611 Glycine max
Glyma.17G251500 5.0kb downstream 5.0kb downstream 9172   true Chr17: 40610440-40619611 Glycine max
Glyma.17G251500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 40610440-40615439 Glycine max
Glyma.17G251500 10.0kb upstream 10.0kb upstream 14172   true Chr17: 40615440-40629611 Glycine max
Glyma.17G251500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 40619612-40629611 Glycine max
Glyma.17G251500 10.0kb downstream 10.0kb downstream 14172   true Chr17: 40605440-40619611 Glycine max
Glyma.17G251500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 40605440-40615439 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304674 5265 Fabidae View MSA
124063202 5270 Rosid View MSA
123747341 5271 Pentapetalae View MSA
122790799 5272 Eudicot View MSA
122049170 5273 Angiosperm View MSA
123429062 5275 Viridiplantae View MSA
121348967 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.84172 0.0 15.8022    
cufflinks 4.62155 0.0 21.6203    
cufflinks 2.2494 0.0 11.557   Low
cufflinks 8.35548 0.0 33.9093    
cufflinks 7.56078 0.0 31.2432    
cufflinks 6.78319 0.0 25.9923    
cufflinks 1.57127 0.0 10.2112   Low
cufflinks 8.08651 0.0 34.52    
cufflinks 6.03758 0.0 25.6009    
cufflinks 1.674       High
cufflinks 0.163       Low
cufflinks 0.643        
cufflinks 0.65        
cufflinks 0.71        
cufflinks 0.058       Low
cufflinks 0.818        
cufflinks 0.167       Low
cufflinks 0.9        
cufflinks 0.732        
cufflinks 0.451        
cufflinks 0.303        
cufflinks 0.465        
cufflinks 0.289        
cufflinks 0.19        
cufflinks 0.628        
cufflinks 0.382        

0 Strain