Gene : Glyma.17G253500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31898:SF1 - TRANSMEMBRANE PROTEIN 136 Genomic Order:  2535
Name:  ? Glyma.17G253500 Secondary Identifier:  ? PAC:30480181
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G253500 0.5kb upstream 0.5kb upstream 3928   true Chr17: 40753937-40757864 Glycine max
Glyma.17G253500 0.5kb upstream 0.5kb upstream 500   false Chr17: 40753937-40754436 Glycine max
Glyma.17G253500 0.5kb downstream 0.5kb downstream 3928   true Chr17: 40754437-40758364 Glycine max
Glyma.17G253500 0.5kb downstream 0.5kb downstream 500   false Chr17: 40757865-40758364 Glycine max
Glyma.17G253500 1.0kb upstream 1.0kb upstream 4428   true Chr17: 40753437-40757864 Glycine max
Glyma.17G253500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 40753437-40754436 Glycine max
Glyma.17G253500 1.0kb downstream 1.0kb downstream 4428   true Chr17: 40754437-40758864 Glycine max
Glyma.17G253500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 40757865-40758864 Glycine max
Glyma.17G253500 2.0kb upstream 2.0kb upstream 5428   true Chr17: 40752437-40757864 Glycine max
Glyma.17G253500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 40752437-40754436 Glycine max
Glyma.17G253500 2.0kb downstream 2.0kb downstream 5428   true Chr17: 40754437-40759864 Glycine max
Glyma.17G253500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 40757865-40759864 Glycine max
Glyma.17G253500 5.0kb upstream 5.0kb upstream 8428   true Chr17: 40749437-40757864 Glycine max
Glyma.17G253500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 40749437-40754436 Glycine max
Glyma.17G253500 5.0kb downstream 5.0kb downstream 8428   true Chr17: 40754437-40762864 Glycine max
Glyma.17G253500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 40757865-40762864 Glycine max
Glyma.17G253500 10.0kb upstream 10.0kb upstream 13428   true Chr17: 40744437-40757864 Glycine max
Glyma.17G253500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 40744437-40754436 Glycine max
Glyma.17G253500 10.0kb downstream 10.0kb downstream 13428   true Chr17: 40754437-40767864 Glycine max
Glyma.17G253500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 40757865-40767864 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304729 5265 Fabidae View MSA
124061810 5270 Rosid View MSA
123740505 5271 Pentapetalae View MSA
122793089 5272 Eudicot View MSA
122047305 5273 Angiosperm View MSA
121344019 5274 Embryophyte View MSA
123425405 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.23598 0.0 17.4671    
cufflinks 9.7509 0.0 36.7604   High
cufflinks 2.24523 0.0 11.0968    
cufflinks 11.1733 0.0 41.0846   High
cufflinks 0.183845 0.0 0.721295 Low Low
cufflinks 2.30986 0.0 11.4471    
cufflinks 3.38064 0.0 15.0278    
cufflinks 4.4398 0.0 17.9253    
cufflinks 0.459341 0.0 3.16968   Low
cufflinks 0.756        
cufflinks 0.006     Low Low
cufflinks 0.864        
cufflinks 0.015     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low Low
cufflinks 3.974       High
cufflinks 0.219        
cufflinks 3.795        
cufflinks 2.306        
cufflinks 3.108        
cufflinks 0.011     Low Low
cufflinks 3.226        
cufflinks 2.93        
cufflinks 0.018     Low  
cufflinks 2.553        
cufflinks 0.004     Low Low

0 Strain