Gene : Glyma.17G253700 G. max Wm82.a2.v1
Defline:  (1 of 3) 2.4.1.245 - Alpha,alpha-trehalose synthase / Trehalose synthetase Genomic Order:  2537
Name:  ? Glyma.17G253700 Secondary Identifier:  ? PAC:30479004
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G253700 0.5kb upstream 0.5kb upstream 4985   true Chr17: 40762033-40767017 Glycine max
Glyma.17G253700 0.5kb upstream 0.5kb upstream 500   false Chr17: 40766518-40767017 Glycine max
Glyma.17G253700 0.5kb downstream 0.5kb downstream 4985   true Chr17: 40761533-40766517 Glycine max
Glyma.17G253700 0.5kb downstream 0.5kb downstream 500   false Chr17: 40761533-40762032 Glycine max
Glyma.17G253700 1.0kb upstream 1.0kb upstream 5485   true Chr17: 40762033-40767517 Glycine max
Glyma.17G253700 1.0kb upstream 1.0kb upstream 1000   false Chr17: 40766518-40767517 Glycine max
Glyma.17G253700 1.0kb downstream 1.0kb downstream 5485   true Chr17: 40761033-40766517 Glycine max
Glyma.17G253700 1.0kb downstream 1.0kb downstream 1000   false Chr17: 40761033-40762032 Glycine max
Glyma.17G253700 2.0kb upstream 2.0kb upstream 6485   true Chr17: 40762033-40768517 Glycine max
Glyma.17G253700 2.0kb upstream 2.0kb upstream 2000   false Chr17: 40766518-40768517 Glycine max
Glyma.17G253700 2.0kb downstream 2.0kb downstream 6485   true Chr17: 40760033-40766517 Glycine max
Glyma.17G253700 2.0kb downstream 2.0kb downstream 2000   false Chr17: 40760033-40762032 Glycine max
Glyma.17G253700 5.0kb upstream 5.0kb upstream 9485   true Chr17: 40762033-40771517 Glycine max
Glyma.17G253700 5.0kb upstream 5.0kb upstream 5000   false Chr17: 40766518-40771517 Glycine max
Glyma.17G253700 5.0kb downstream 5.0kb downstream 9485   true Chr17: 40757033-40766517 Glycine max
Glyma.17G253700 5.0kb downstream 5.0kb downstream 5000   false Chr17: 40757033-40762032 Glycine max
Glyma.17G253700 10.0kb upstream 10.0kb upstream 14485   true Chr17: 40762033-40776517 Glycine max
Glyma.17G253700 10.0kb upstream 10.0kb upstream 10000   false Chr17: 40766518-40776517 Glycine max
Glyma.17G253700 10.0kb downstream 10.0kb downstream 14485   true Chr17: 40752033-40766517 Glycine max
Glyma.17G253700 10.0kb downstream 10.0kb downstream 10000   false Chr17: 40752033-40762032 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043473 5273 Angiosperm View MSA
122309718 5265 Fabidae View MSA
124065607 5270 Rosid View MSA
123746815 5271 Pentapetalae View MSA
122786445 5272 Eudicot View MSA
121310134 5274 Embryophyte View MSA
123347706 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.10641 0.0 14.9139    
cufflinks 6.60967 0.0 24.7672    
cufflinks 2.10376 0.0 7.22396   Low
cufflinks 10.1196 0.0 35.5024    
cufflinks 11.8601 0.0 40.9729   High
cufflinks 7.53055 0.0 27.529    
cufflinks 7.83367 0.0 28.4227    
cufflinks 9.99078 0.0 34.8875    
cufflinks 4.74526 0.0 19.1494    
cufflinks 3.548        
cufflinks 0.225       Low
cufflinks 1.048        
cufflinks 3.758        
cufflinks 5.486       High
cufflinks 0.156       Low
cufflinks 3.314        
cufflinks 0.641        
cufflinks 2.281        
cufflinks 2.592        
cufflinks 2.885        
cufflinks 0.534        
cufflinks 3.298        
cufflinks 3.658        
cufflinks 0.317       Low
cufflinks 3.023        
cufflinks 0.763        

0 Strain