Gene : Glyma.17G254500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11702:SF3 - GTP-BINDING PROTEIN 10 Genomic Order:  2545
Name:  ? Glyma.17G254500 Secondary Identifier:  ? PAC:30479836
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G254500 0.5kb upstream 0.5kb upstream 5856   true Chr17: 40839337-40845192 Glycine max
Glyma.17G254500 0.5kb upstream 0.5kb upstream 500   false Chr17: 40839337-40839836 Glycine max
Glyma.17G254500 0.5kb downstream 0.5kb downstream 5856   true Chr17: 40839837-40845692 Glycine max
Glyma.17G254500 0.5kb downstream 0.5kb downstream 500   false Chr17: 40845193-40845692 Glycine max
Glyma.17G254500 1.0kb upstream 1.0kb upstream 6356   true Chr17: 40838837-40845192 Glycine max
Glyma.17G254500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 40838837-40839836 Glycine max
Glyma.17G254500 1.0kb downstream 1.0kb downstream 6356   true Chr17: 40839837-40846192 Glycine max
Glyma.17G254500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 40845193-40846192 Glycine max
Glyma.17G254500 2.0kb upstream 2.0kb upstream 7356   true Chr17: 40837837-40845192 Glycine max
Glyma.17G254500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 40837837-40839836 Glycine max
Glyma.17G254500 2.0kb downstream 2.0kb downstream 7356   true Chr17: 40839837-40847192 Glycine max
Glyma.17G254500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 40845193-40847192 Glycine max
Glyma.17G254500 5.0kb upstream 5.0kb upstream 10356   true Chr17: 40834837-40845192 Glycine max
Glyma.17G254500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 40834837-40839836 Glycine max
Glyma.17G254500 5.0kb downstream 5.0kb downstream 10356   true Chr17: 40839837-40850192 Glycine max
Glyma.17G254500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 40845193-40850192 Glycine max
Glyma.17G254500 10.0kb upstream 10.0kb upstream 15356   true Chr17: 40829837-40845192 Glycine max
Glyma.17G254500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 40829837-40839836 Glycine max
Glyma.17G254500 10.0kb downstream 10.0kb downstream 15356   true Chr17: 40839837-40855192 Glycine max
Glyma.17G254500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 40845193-40855192 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308484 5265 Fabidae View MSA
124071003 5270 Rosid View MSA
123742673 5271 Pentapetalae View MSA
122794065 5272 Eudicot View MSA
122048134 5273 Angiosperm View MSA
121348183 5274 Embryophyte View MSA
123428506 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.4957 0.0 49.6404   High
cufflinks 7.75833 0.0 21.0014    
cufflinks 6.03364 0.0 16.6106    
cufflinks 8.43468 0.0 22.7337    
cufflinks 4.56063 0.0 12.8566    
cufflinks 3.39359 0.0 9.92165   Low
cufflinks 5.38902 0.0 14.9719    
cufflinks 7.29273 0.0 19.7976    
cufflinks 4.09036 0.0 11.6766    
cufflinks 2.448        
cufflinks 1.125        
cufflinks 3.656        
cufflinks 1.066       Low
cufflinks 1.104        
cufflinks 1.036       Low
cufflinks 5.486       High
cufflinks 0.866       Low
cufflinks 3.748        
cufflinks 3.355        
cufflinks 6.672       High
cufflinks 1.387        
cufflinks 6.233       High
cufflinks 6.299       High
cufflinks 1.505        
cufflinks 6.111       High
cufflinks 1.016       Low

0 Strain