Gene : Glyma.17G241500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31471:SF13 - REMORIN-LIKE PROTEIN Genomic Order:  2415
Name:  ? Glyma.17G241500 Secondary Identifier:  ? PAC:30478922
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G241500 0.5kb upstream 0.5kb upstream 5646   true Chr17: 39721566-39727211 Glycine max
Glyma.17G241500 0.5kb upstream 0.5kb upstream 500   false Chr17: 39726712-39727211 Glycine max
Glyma.17G241500 0.5kb downstream 0.5kb downstream 5646   true Chr17: 39721066-39726711 Glycine max
Glyma.17G241500 0.5kb downstream 0.5kb downstream 500   false Chr17: 39721066-39721565 Glycine max
Glyma.17G241500 1.0kb upstream 1.0kb upstream 6146   true Chr17: 39721566-39727711 Glycine max
Glyma.17G241500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 39726712-39727711 Glycine max
Glyma.17G241500 1.0kb downstream 1.0kb downstream 6146   true Chr17: 39720566-39726711 Glycine max
Glyma.17G241500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 39720566-39721565 Glycine max
Glyma.17G241500 2.0kb upstream 2.0kb upstream 7146   true Chr17: 39721566-39728711 Glycine max
Glyma.17G241500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 39726712-39728711 Glycine max
Glyma.17G241500 2.0kb downstream 2.0kb downstream 7146   true Chr17: 39719566-39726711 Glycine max
Glyma.17G241500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 39719566-39721565 Glycine max
Glyma.17G241500 5.0kb upstream 5.0kb upstream 10146   true Chr17: 39721566-39731711 Glycine max
Glyma.17G241500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 39726712-39731711 Glycine max
Glyma.17G241500 5.0kb downstream 5.0kb downstream 10146   true Chr17: 39716566-39726711 Glycine max
Glyma.17G241500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 39716566-39721565 Glycine max
Glyma.17G241500 10.0kb upstream 10.0kb upstream 15146   true Chr17: 39721566-39736711 Glycine max
Glyma.17G241500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 39726712-39736711 Glycine max
Glyma.17G241500 10.0kb downstream 10.0kb downstream 15146   true Chr17: 39711566-39726711 Glycine max
Glyma.17G241500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 39711566-39721565 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122244426 5265 Fabidae Singleton cluster - no MSA
124060988 5270 Rosid View MSA
123736964 5271 Pentapetalae View MSA
122788463 5272 Eudicot View MSA
122043924 5273 Angiosperm View MSA
121348920 5274 Embryophyte View MSA
123381079 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.497706 0.0 2.98492   Low
cufflinks 7.95872 0.0 27.6767    
cufflinks 0.784729 0.0 4.26283   Low
cufflinks 5.01556 0.0 18.5534    
cufflinks 7.43594 0.0 25.9558    
cufflinks 4.55804 0.0 17.2153    
cufflinks 12.5118 0.0 43.3176   High
cufflinks 3.83591 0.0 15.3321    
cufflinks 4.86219 0.0 18.1103    
cufflinks 0.443        
cufflinks 0.125       Low
cufflinks 0.807        
cufflinks 1.719       High
cufflinks 1.746       High
cufflinks 0.154       Low
cufflinks 0.589        
cufflinks 0.36        
cufflinks 0.969        
cufflinks 2.251       High
cufflinks 0.361        
cufflinks 0.187        
cufflinks 0.49        
cufflinks 0.612        
cufflinks 0.066       Low
cufflinks 0.455        
cufflinks 0.33        

0 Strain