Gene : Glyma.17G241800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13375 - FMS INTERACTING PROTEIN Genomic Order:  2418
Name:  ? Glyma.17G241800 Secondary Identifier:  ? PAC:30481327
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G241800 0.5kb upstream 0.5kb upstream 4000   true Chr17: 39743219-39747218 Glycine max
Glyma.17G241800 0.5kb upstream 0.5kb upstream 500   false Chr17: 39743219-39743718 Glycine max
Glyma.17G241800 0.5kb downstream 0.5kb downstream 4000   true Chr17: 39743719-39747718 Glycine max
Glyma.17G241800 0.5kb downstream 0.5kb downstream 500   false Chr17: 39747219-39747718 Glycine max
Glyma.17G241800 1.0kb upstream 1.0kb upstream 4500   true Chr17: 39742719-39747218 Glycine max
Glyma.17G241800 1.0kb upstream 1.0kb upstream 1000   false Chr17: 39742719-39743718 Glycine max
Glyma.17G241800 1.0kb downstream 1.0kb downstream 4500   true Chr17: 39743719-39748218 Glycine max
Glyma.17G241800 1.0kb downstream 1.0kb downstream 1000   false Chr17: 39747219-39748218 Glycine max
Glyma.17G241800 2.0kb upstream 2.0kb upstream 5500   true Chr17: 39741719-39747218 Glycine max
Glyma.17G241800 2.0kb upstream 2.0kb upstream 2000   false Chr17: 39741719-39743718 Glycine max
Glyma.17G241800 2.0kb downstream 2.0kb downstream 5500   true Chr17: 39743719-39749218 Glycine max
Glyma.17G241800 2.0kb downstream 2.0kb downstream 2000   false Chr17: 39747219-39749218 Glycine max
Glyma.17G241800 5.0kb upstream 5.0kb upstream 8500   true Chr17: 39738719-39747218 Glycine max
Glyma.17G241800 5.0kb upstream 5.0kb upstream 5000   false Chr17: 39738719-39743718 Glycine max
Glyma.17G241800 5.0kb downstream 5.0kb downstream 8500   true Chr17: 39743719-39752218 Glycine max
Glyma.17G241800 5.0kb downstream 5.0kb downstream 5000   false Chr17: 39747219-39752218 Glycine max
Glyma.17G241800 10.0kb upstream 10.0kb upstream 13500   true Chr17: 39733719-39747218 Glycine max
Glyma.17G241800 10.0kb upstream 10.0kb upstream 10000   false Chr17: 39733719-39743718 Glycine max
Glyma.17G241800 10.0kb downstream 10.0kb downstream 13500   true Chr17: 39743719-39757218 Glycine max
Glyma.17G241800 10.0kb downstream 10.0kb downstream 10000   false Chr17: 39747219-39757218 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026540 5273 Angiosperm View MSA
122253772 5265 Fabidae View MSA
124037327 5270 Rosid View MSA
123610279 5271 Pentapetalae View MSA
122644905 5272 Eudicot View MSA
121296375 5274 Embryophyte View MSA
123425483 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.9558 0.0 41.6228   High
cufflinks 11.5934 0.0 40.6884    
cufflinks 7.57413 0.0 28.2338   Low
cufflinks 9.58401 0.0 34.2393    
cufflinks 9.29789 0.0 33.5011    
cufflinks 8.85634 0.0 32.2922    
cufflinks 9.19894 0.0 33.5964    
cufflinks 12.719 0.0 44.7682   High
cufflinks 9.94962 0.0 35.8099    
cufflinks 2.246        
cufflinks 1.217       Low
cufflinks 2.307        
cufflinks 2.204        
cufflinks 2.327        
cufflinks 1.613        
cufflinks 2.531        
cufflinks 1.217       Low
cufflinks 2.234        
cufflinks 2.746       High
cufflinks 2.653        
cufflinks 1.564        
cufflinks 2.551        
cufflinks 2.861       High
cufflinks 1.367       Low
cufflinks 2.595        
cufflinks 1.438       Low

0 Strain