Gene : Glyma.17G242000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24356:SF195 - PROTEIN KINASE FAMILY PROTEIN Genomic Order:  2420
Name:  ? Glyma.17G242000 Secondary Identifier:  ? PAC:30482144
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G242000 0.5kb upstream 0.5kb upstream 7124   true Chr17: 39757010-39764133 Glycine max
Glyma.17G242000 0.5kb upstream 0.5kb upstream 500   false Chr17: 39757010-39757509 Glycine max
Glyma.17G242000 0.5kb downstream 0.5kb downstream 7124   true Chr17: 39757510-39764633 Glycine max
Glyma.17G242000 0.5kb downstream 0.5kb downstream 500   false Chr17: 39764134-39764633 Glycine max
Glyma.17G242000 1.0kb upstream 1.0kb upstream 7624   true Chr17: 39756510-39764133 Glycine max
Glyma.17G242000 1.0kb upstream 1.0kb upstream 1000   false Chr17: 39756510-39757509 Glycine max
Glyma.17G242000 1.0kb downstream 1.0kb downstream 7624   true Chr17: 39757510-39765133 Glycine max
Glyma.17G242000 1.0kb downstream 1.0kb downstream 1000   false Chr17: 39764134-39765133 Glycine max
Glyma.17G242000 2.0kb upstream 2.0kb upstream 8624   true Chr17: 39755510-39764133 Glycine max
Glyma.17G242000 2.0kb upstream 2.0kb upstream 2000   false Chr17: 39755510-39757509 Glycine max
Glyma.17G242000 2.0kb downstream 2.0kb downstream 8624   true Chr17: 39757510-39766133 Glycine max
Glyma.17G242000 2.0kb downstream 2.0kb downstream 2000   false Chr17: 39764134-39766133 Glycine max
Glyma.17G242000 5.0kb upstream 5.0kb upstream 11624   true Chr17: 39752510-39764133 Glycine max
Glyma.17G242000 5.0kb upstream 5.0kb upstream 5000   false Chr17: 39752510-39757509 Glycine max
Glyma.17G242000 5.0kb downstream 5.0kb downstream 11624   true Chr17: 39757510-39769133 Glycine max
Glyma.17G242000 5.0kb downstream 5.0kb downstream 5000   false Chr17: 39764134-39769133 Glycine max
Glyma.17G242000 10.0kb upstream 10.0kb upstream 16624   true Chr17: 39747510-39764133 Glycine max
Glyma.17G242000 10.0kb upstream 10.0kb upstream 10000   false Chr17: 39747510-39757509 Glycine max
Glyma.17G242000 10.0kb downstream 10.0kb downstream 16624   true Chr17: 39757510-39774133 Glycine max
Glyma.17G242000 10.0kb downstream 10.0kb downstream 10000   false Chr17: 39764134-39774133 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030206 5273 Angiosperm View MSA
122303301 5265 Fabidae View MSA
124066801 5270 Rosid View MSA
123738504 5271 Pentapetalae View MSA
122787356 5272 Eudicot View MSA
121299416 5274 Embryophyte View MSA
123428649 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3849 0.0 30.4044    
cufflinks 5.364 0.0 14.894   Low
cufflinks 9.67737 0.0 25.9337    
cufflinks 14.1336 0.0 37.7182    
cufflinks 19.5169 0.0 52.5117   High
cufflinks 21.1312 0.0 57.048   High
cufflinks 5.52741 0.0 15.3485   Low
cufflinks 14.6466 0.0 39.1054    
cufflinks 12.0104 0.0 32.0536    
cufflinks 8.313     High  
cufflinks 15.257     High High
cufflinks 3.686        
cufflinks 9.862     High  
cufflinks 10.117     High  
cufflinks 17.595     High High
cufflinks 4.455        
cufflinks 9.388     High  
cufflinks 4.792        
cufflinks 3.194       Low
cufflinks 2.828       Low
cufflinks 21.58     High High
cufflinks 3.26       Low
cufflinks 3.05       Low
cufflinks 13.456     High  
cufflinks 2.552       Low
cufflinks 18.818     High High

0 Strain