Gene : Glyma.17G246600 G. max Wm82.a2.v1
Defline:  (1 of 1) PF04129//PF09763//PF15277 - Vps52 / Sac2 family (Vps52) // Exocyst complex component Sec3 (Sec3_C) // Exocyst complex component SEC3 N-terminal PIP2 binding PH (Sec3-PIP2_bind) Genomic Order:  2466
Name:  ? Glyma.17G246600 Secondary Identifier:  ? PAC:30481408
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G246600 0.5kb upstream 0.5kb upstream 15360   true Chr17: 40245376-40260735 Glycine max
Glyma.17G246600 0.5kb upstream 0.5kb upstream 500   false Chr17: 40260236-40260735 Glycine max
Glyma.17G246600 0.5kb downstream 0.5kb downstream 15360   true Chr17: 40244876-40260235 Glycine max
Glyma.17G246600 0.5kb downstream 0.5kb downstream 500   false Chr17: 40244876-40245375 Glycine max
Glyma.17G246600 1.0kb upstream 1.0kb upstream 15860   true Chr17: 40245376-40261235 Glycine max
Glyma.17G246600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 40260236-40261235 Glycine max
Glyma.17G246600 1.0kb downstream 1.0kb downstream 15860   true Chr17: 40244376-40260235 Glycine max
Glyma.17G246600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 40244376-40245375 Glycine max
Glyma.17G246600 2.0kb upstream 2.0kb upstream 16860   true Chr17: 40245376-40262235 Glycine max
Glyma.17G246600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 40260236-40262235 Glycine max
Glyma.17G246600 2.0kb downstream 2.0kb downstream 16860   true Chr17: 40243376-40260235 Glycine max
Glyma.17G246600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 40243376-40245375 Glycine max
Glyma.17G246600 5.0kb upstream 5.0kb upstream 19860   true Chr17: 40245376-40265235 Glycine max
Glyma.17G246600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 40260236-40265235 Glycine max
Glyma.17G246600 5.0kb downstream 5.0kb downstream 19860   true Chr17: 40240376-40260235 Glycine max
Glyma.17G246600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 40240376-40245375 Glycine max
Glyma.17G246600 10.0kb upstream 10.0kb upstream 24860   true Chr17: 40245376-40270235 Glycine max
Glyma.17G246600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 40260236-40270235 Glycine max
Glyma.17G246600 10.0kb downstream 10.0kb downstream 24860   true Chr17: 40235376-40260235 Glycine max
Glyma.17G246600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 40235376-40245375 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305071 5265 Fabidae View MSA
124062272 5270 Rosid View MSA
123744034 5271 Pentapetalae View MSA
122788203 5272 Eudicot View MSA
122043094 5273 Angiosperm View MSA
121346884 5274 Embryophyte View MSA
123428518 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.96222 0.0 35.2859   Low
cufflinks 15.2244 0.0 54.9671    
cufflinks 14.7447 0.0 53.1064    
cufflinks 16.6988 0.0 61.249    
cufflinks 14.1666 0.0 50.7495    
cufflinks 14.2174 0.0 51.0323    
cufflinks 23.6663 0.0 91.7745 High High
cufflinks 16.6966 0.0 61.8058    
cufflinks 14.0249 0.0 50.2852    
cufflinks 2.305       High
cufflinks 1.422       Low
cufflinks 1.633        
cufflinks 1.894        
cufflinks 2.087       High
cufflinks 1.569        
cufflinks 1.97        
cufflinks 1.424       Low
cufflinks 2.005        
cufflinks 2.081        
cufflinks 1.973        
cufflinks 1.533        
cufflinks 1.951        
cufflinks 1.874        
cufflinks 1.319       Low
cufflinks 1.873        
cufflinks 1.529        

0 Strain