Gene : Glyma.17G247400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11206:SF115 - MATE EFFLUX FAMILY PROTEIN Genomic Order:  2474
Name:  ? Glyma.17G247400 Secondary Identifier:  ? PAC:30481788
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G247400 0.5kb upstream 0.5kb upstream 7486   true Chr17: 40283791-40291276 Glycine max
Glyma.17G247400 0.5kb upstream 0.5kb upstream 500   false Chr17: 40290777-40291276 Glycine max
Glyma.17G247400 0.5kb downstream 0.5kb downstream 7486   true Chr17: 40283291-40290776 Glycine max
Glyma.17G247400 0.5kb downstream 0.5kb downstream 500   false Chr17: 40283291-40283790 Glycine max
Glyma.17G247400 1.0kb upstream 1.0kb upstream 7986   true Chr17: 40283791-40291776 Glycine max
Glyma.17G247400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 40290777-40291776 Glycine max
Glyma.17G247400 1.0kb downstream 1.0kb downstream 7986   true Chr17: 40282791-40290776 Glycine max
Glyma.17G247400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 40282791-40283790 Glycine max
Glyma.17G247400 2.0kb upstream 2.0kb upstream 8986   true Chr17: 40283791-40292776 Glycine max
Glyma.17G247400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 40290777-40292776 Glycine max
Glyma.17G247400 2.0kb downstream 2.0kb downstream 8986   true Chr17: 40281791-40290776 Glycine max
Glyma.17G247400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 40281791-40283790 Glycine max
Glyma.17G247400 5.0kb upstream 5.0kb upstream 11986   true Chr17: 40283791-40295776 Glycine max
Glyma.17G247400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 40290777-40295776 Glycine max
Glyma.17G247400 5.0kb downstream 5.0kb downstream 11986   true Chr17: 40278791-40290776 Glycine max
Glyma.17G247400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 40278791-40283790 Glycine max
Glyma.17G247400 10.0kb upstream 10.0kb upstream 16986   true Chr17: 40283791-40300776 Glycine max
Glyma.17G247400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 40290777-40300776 Glycine max
Glyma.17G247400 10.0kb downstream 10.0kb downstream 16986   true Chr17: 40273791-40290776 Glycine max
Glyma.17G247400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 40273791-40283790 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308570 5265 Fabidae View MSA
124068404 5270 Rosid View MSA
123646707 5271 Pentapetalae View MSA
122792488 5272 Eudicot View MSA
122050809 5273 Angiosperm View MSA
121344541 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.313941 0.0 1.18726   Low
cufflinks 11.2857 0.0 30.4808    
cufflinks 4.78324 0.0 13.8992    
cufflinks 18.6777 0.0 49.8312   High
cufflinks 2.44204 0.0 7.84209    
cufflinks 2.81128 0.0 8.82319    
cufflinks 24.4485 0.0 65.4651 High High
cufflinks 10.4767 0.0 28.3962    
cufflinks 1.40781 0.0 4.83697    
cufflinks 11.525     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.735        
cufflinks 0.057     Low  
cufflinks 0.05     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.78        
cufflinks 0.177        
cufflinks 9.572     High High
cufflinks 1.276        
cufflinks 0.377        
cufflinks 0.01     Low Low
cufflinks 0.544        
cufflinks 1.081        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.62        
cufflinks 0.019     Low Low

0 Strain