Gene : Glyma.17G233800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10516//PTHR10516:SF299 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE Genomic Order:  2338
Name:  ? Glyma.17G233800 Secondary Identifier:  ? PAC:30479475
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G233800 0.5kb upstream 0.5kb upstream 9436   true Chr17: 38929683-38939118 Glycine max
Glyma.17G233800 0.5kb upstream 0.5kb upstream 500   false Chr17: 38929683-38930182 Glycine max
Glyma.17G233800 0.5kb downstream 0.5kb downstream 9436   true Chr17: 38930183-38939618 Glycine max
Glyma.17G233800 0.5kb downstream 0.5kb downstream 500   false Chr17: 38939119-38939618 Glycine max
Glyma.17G233800 1.0kb upstream 1.0kb upstream 9936   true Chr17: 38929183-38939118 Glycine max
Glyma.17G233800 1.0kb upstream 1.0kb upstream 1000   false Chr17: 38929183-38930182 Glycine max
Glyma.17G233800 1.0kb downstream 1.0kb downstream 9936   true Chr17: 38930183-38940118 Glycine max
Glyma.17G233800 1.0kb downstream 1.0kb downstream 1000   false Chr17: 38939119-38940118 Glycine max
Glyma.17G233800 2.0kb upstream 2.0kb upstream 10936   true Chr17: 38928183-38939118 Glycine max
Glyma.17G233800 2.0kb upstream 2.0kb upstream 2000   false Chr17: 38928183-38930182 Glycine max
Glyma.17G233800 2.0kb downstream 2.0kb downstream 10936   true Chr17: 38930183-38941118 Glycine max
Glyma.17G233800 2.0kb downstream 2.0kb downstream 2000   false Chr17: 38939119-38941118 Glycine max
Glyma.17G233800 5.0kb upstream 5.0kb upstream 13936   true Chr17: 38925183-38939118 Glycine max
Glyma.17G233800 5.0kb upstream 5.0kb upstream 5000   false Chr17: 38925183-38930182 Glycine max
Glyma.17G233800 5.0kb downstream 5.0kb downstream 13936   true Chr17: 38930183-38944118 Glycine max
Glyma.17G233800 5.0kb downstream 5.0kb downstream 5000   false Chr17: 38939119-38944118 Glycine max
Glyma.17G233800 10.0kb upstream 10.0kb upstream 18936   true Chr17: 38920183-38939118 Glycine max
Glyma.17G233800 10.0kb upstream 10.0kb upstream 10000   false Chr17: 38920183-38930182 Glycine max
Glyma.17G233800 10.0kb downstream 10.0kb downstream 18936   true Chr17: 38930183-38949118 Glycine max
Glyma.17G233800 10.0kb downstream 10.0kb downstream 10000   false Chr17: 38939119-38949118 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308225 5265 Fabidae View MSA
124067136 5270 Rosid View MSA
123746363 5271 Pentapetalae View MSA
122792796 5272 Eudicot View MSA
122047440 5273 Angiosperm View MSA
121347490 5274 Embryophyte View MSA
123426312 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.97493 0.0 24.6937    
cufflinks 7.69447 0.0 27.0336    
cufflinks 9.745 0.0 33.3634    
cufflinks 13.6559 0.0 46.4123   High
cufflinks 6.83063 0.0 21.0114    
cufflinks 5.54796 0.0 20.4948   Low
cufflinks 8.24263 0.0 28.6137    
cufflinks 13.4908 0.0 45.8214   High
cufflinks 10.5745 0.0 36.0769    
cufflinks 1.416        
cufflinks 0.396       Low
cufflinks 2.068       High
cufflinks 1.085        
cufflinks 1.054        
cufflinks 0.491       Low
cufflinks 1.068        
cufflinks 0.817        
cufflinks 2.016       High
cufflinks 1.298        
cufflinks 0.994        
cufflinks 0.499       Low
cufflinks 1.143        
cufflinks 1.146        
cufflinks 0.454       Low
cufflinks 1.03        
cufflinks 1.355        

0 Strain