Gene : Glyma.17G235100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12354 - INTERFERON-RELATED DEVELOPMENTAL REGULATOR Genomic Order:  2351
Name:  ? Glyma.17G235100 Secondary Identifier:  ? PAC:30480077
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G235100 0.5kb upstream 0.5kb upstream 6848   true Chr17: 39018703-39025550 Glycine max
Glyma.17G235100 0.5kb upstream 0.5kb upstream 500   false Chr17: 39025051-39025550 Glycine max
Glyma.17G235100 0.5kb downstream 0.5kb downstream 6848   true Chr17: 39018203-39025050 Glycine max
Glyma.17G235100 0.5kb downstream 0.5kb downstream 500   false Chr17: 39018203-39018702 Glycine max
Glyma.17G235100 1.0kb upstream 1.0kb upstream 7348   true Chr17: 39018703-39026050 Glycine max
Glyma.17G235100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 39025051-39026050 Glycine max
Glyma.17G235100 1.0kb downstream 1.0kb downstream 7348   true Chr17: 39017703-39025050 Glycine max
Glyma.17G235100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 39017703-39018702 Glycine max
Glyma.17G235100 2.0kb upstream 2.0kb upstream 8348   true Chr17: 39018703-39027050 Glycine max
Glyma.17G235100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 39025051-39027050 Glycine max
Glyma.17G235100 2.0kb downstream 2.0kb downstream 8348   true Chr17: 39016703-39025050 Glycine max
Glyma.17G235100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 39016703-39018702 Glycine max
Glyma.17G235100 5.0kb upstream 5.0kb upstream 11348   true Chr17: 39018703-39030050 Glycine max
Glyma.17G235100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 39025051-39030050 Glycine max
Glyma.17G235100 5.0kb downstream 5.0kb downstream 11348   true Chr17: 39013703-39025050 Glycine max
Glyma.17G235100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 39013703-39018702 Glycine max
Glyma.17G235100 10.0kb upstream 10.0kb upstream 16348   true Chr17: 39018703-39035050 Glycine max
Glyma.17G235100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 39025051-39035050 Glycine max
Glyma.17G235100 10.0kb downstream 10.0kb downstream 16348   true Chr17: 39008703-39025050 Glycine max
Glyma.17G235100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 39008703-39018702 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310652 5265 Fabidae View MSA
124065398 5270 Rosid View MSA
123738030 5271 Pentapetalae View MSA
122785868 5272 Eudicot View MSA
122043831 5273 Angiosperm View MSA
121349485 5274 Embryophyte View MSA
123428444 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.2348 0.0 61.0498    
cufflinks 5.80396 0.0 29.3851   Low
cufflinks 12.6427 0.0 58.0402    
cufflinks 13.1478 0.0 57.0276    
cufflinks 7.53523 0.0 37.3118    
cufflinks 18.4278 0.0 78.2424   High
cufflinks 9.42854 0.0 37.1313    
cufflinks 7.08382 0.0 33.1667    
cufflinks 7.01095 0.0 35.2707    
cufflinks 0.628        
cufflinks 1.108       High
cufflinks 0.764        
cufflinks 0.662        
cufflinks 0.551        
cufflinks 0.843        
cufflinks 0.695        
cufflinks 0.372       Low
cufflinks 0.634        
cufflinks 0.524        
cufflinks 0.867        
cufflinks 0.769        
cufflinks 0.775        
cufflinks 0.602        
cufflinks 0.876        
cufflinks 0.945       High
cufflinks 0.456       Low

0 Strain