Gene : Glyma.17G235600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23315:SF64 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED Genomic Order:  2356
Name:  ? Glyma.17G235600 Secondary Identifier:  ? PAC:30480114
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G235600 0.5kb upstream 0.5kb upstream 2794   true Chr17: 39067324-39070117 Glycine max
Glyma.17G235600 0.5kb upstream 0.5kb upstream 500   false Chr17: 39069618-39070117 Glycine max
Glyma.17G235600 0.5kb downstream 0.5kb downstream 2794   true Chr17: 39066824-39069617 Glycine max
Glyma.17G235600 0.5kb downstream 0.5kb downstream 500   false Chr17: 39066824-39067323 Glycine max
Glyma.17G235600 1.0kb upstream 1.0kb upstream 3294   true Chr17: 39067324-39070617 Glycine max
Glyma.17G235600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 39069618-39070617 Glycine max
Glyma.17G235600 1.0kb downstream 1.0kb downstream 3294   true Chr17: 39066324-39069617 Glycine max
Glyma.17G235600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 39066324-39067323 Glycine max
Glyma.17G235600 2.0kb upstream 2.0kb upstream 4294   true Chr17: 39067324-39071617 Glycine max
Glyma.17G235600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 39069618-39071617 Glycine max
Glyma.17G235600 2.0kb downstream 2.0kb downstream 4294   true Chr17: 39065324-39069617 Glycine max
Glyma.17G235600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 39065324-39067323 Glycine max
Glyma.17G235600 5.0kb upstream 5.0kb upstream 7294   true Chr17: 39067324-39074617 Glycine max
Glyma.17G235600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 39069618-39074617 Glycine max
Glyma.17G235600 5.0kb downstream 5.0kb downstream 7294   true Chr17: 39062324-39069617 Glycine max
Glyma.17G235600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 39062324-39067323 Glycine max
Glyma.17G235600 10.0kb upstream 10.0kb upstream 12294   true Chr17: 39067324-39079617 Glycine max
Glyma.17G235600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 39069618-39079617 Glycine max
Glyma.17G235600 10.0kb downstream 10.0kb downstream 12294   true Chr17: 39057324-39069617 Glycine max
Glyma.17G235600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 39057324-39067323 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305892 5265 Fabidae View MSA
124062605 5270 Rosid View MSA
123738053 5271 Pentapetalae View MSA
122796694 5272 Eudicot View MSA
122047574 5273 Angiosperm View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.3374 0.0 35.7642    
cufflinks 5.88354 0.0 16.8535   Low
cufflinks 19.4262 0.0 51.8456    
cufflinks 8.81559 0.0 24.2324    
cufflinks 11.6618 0.0 31.3366    
cufflinks 27.2224 0.0 73.2414 High High
cufflinks 3.71236 0.0 11.166   Low
cufflinks 13.6916 0.0 36.7583    
cufflinks 8.80616 0.0 24.1618    
cufflinks 12.494     High High
cufflinks 10.285     High  
cufflinks 11.236     High  
cufflinks 5.088        
cufflinks 2.81       Low
cufflinks 8.245     High  
cufflinks 5.122        
cufflinks 11.453     High High
cufflinks 6.472        
cufflinks 5.6        
cufflinks 4.03       Low
cufflinks 8.779     High  
cufflinks 4.371       Low
cufflinks 5.893        
cufflinks 13.679     High High
cufflinks 4.892        
cufflinks 11.652     High High

0 Strain