Gene : Glyma.17G235900 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR23213:SF255 - NUCLEIC ACID BINDING PROTEIN Genomic Order:  2359
Name:  ? Glyma.17G235900 Secondary Identifier:  ? PAC:30479984
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G235900 0.5kb upstream 0.5kb upstream 11323   true Chr17: 39087820-39099142 Glycine max
Glyma.17G235900 0.5kb upstream 0.5kb upstream 500   false Chr17: 39098643-39099142 Glycine max
Glyma.17G235900 0.5kb downstream 0.5kb downstream 11323   true Chr17: 39087320-39098642 Glycine max
Glyma.17G235900 0.5kb downstream 0.5kb downstream 500   false Chr17: 39087320-39087819 Glycine max
Glyma.17G235900 1.0kb upstream 1.0kb upstream 11823   true Chr17: 39087820-39099642 Glycine max
Glyma.17G235900 1.0kb upstream 1.0kb upstream 1000   false Chr17: 39098643-39099642 Glycine max
Glyma.17G235900 1.0kb downstream 1.0kb downstream 11823   true Chr17: 39086820-39098642 Glycine max
Glyma.17G235900 1.0kb downstream 1.0kb downstream 1000   false Chr17: 39086820-39087819 Glycine max
Glyma.17G235900 2.0kb upstream 2.0kb upstream 12823   true Chr17: 39087820-39100642 Glycine max
Glyma.17G235900 2.0kb upstream 2.0kb upstream 2000   false Chr17: 39098643-39100642 Glycine max
Glyma.17G235900 2.0kb downstream 2.0kb downstream 12823   true Chr17: 39085820-39098642 Glycine max
Glyma.17G235900 2.0kb downstream 2.0kb downstream 2000   false Chr17: 39085820-39087819 Glycine max
Glyma.17G235900 5.0kb upstream 5.0kb upstream 15823   true Chr17: 39087820-39103642 Glycine max
Glyma.17G235900 5.0kb upstream 5.0kb upstream 5000   false Chr17: 39098643-39103642 Glycine max
Glyma.17G235900 5.0kb downstream 5.0kb downstream 15823   true Chr17: 39082820-39098642 Glycine max
Glyma.17G235900 5.0kb downstream 5.0kb downstream 5000   false Chr17: 39082820-39087819 Glycine max
Glyma.17G235900 10.0kb upstream 10.0kb upstream 20823   true Chr17: 39087820-39108642 Glycine max
Glyma.17G235900 10.0kb upstream 10.0kb upstream 10000   false Chr17: 39098643-39108642 Glycine max
Glyma.17G235900 10.0kb downstream 10.0kb downstream 20823   true Chr17: 39077820-39098642 Glycine max
Glyma.17G235900 10.0kb downstream 10.0kb downstream 10000   false Chr17: 39077820-39087819 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303978 5265 Fabidae View MSA
124069549 5270 Rosid View MSA
123741319 5271 Pentapetalae View MSA
122794121 5272 Eudicot View MSA
122043099 5273 Angiosperm View MSA
121349744 5274 Embryophyte View MSA
123381424 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.36407 0.0 13.3719    
cufflinks 4.60219 0.0 14.0322    
cufflinks 4.36216 0.0 13.3586    
cufflinks 7.3742 0.0 25.2058   High
cufflinks 3.93514 0.0 14.13    
cufflinks 1.76513 0.0 6.51214   Low
cufflinks 6.93933 0.0 23.7635   High
cufflinks 3.25233 0.0 10.4145    
cufflinks 3.496 0.0 12.7224    
cufflinks 0.505        
cufflinks 0.142       Low
cufflinks 1.055        
cufflinks 0.564        
cufflinks 0.615        
cufflinks 0.216       Low
cufflinks 1.077        
cufflinks 0.654        
cufflinks 1.155        
cufflinks 1.314       High
cufflinks 1.101        
cufflinks 0.149       Low
cufflinks 1.112        
cufflinks 1.102        
cufflinks 0.181       Low
cufflinks 1.061        
cufflinks 0.338        

0 Strain