Gene : Glyma.17G236100 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED Genomic Order:  2361
Name:  ? Glyma.17G236100 Secondary Identifier:  ? PAC:30481088
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G236100 0.5kb upstream 0.5kb upstream 3221   true Chr17: 39110896-39114116 Glycine max
Glyma.17G236100 0.5kb upstream 0.5kb upstream 500   false Chr17: 39110896-39111395 Glycine max
Glyma.17G236100 0.5kb downstream 0.5kb downstream 3221   true Chr17: 39111396-39114616 Glycine max
Glyma.17G236100 0.5kb downstream 0.5kb downstream 500   false Chr17: 39114117-39114616 Glycine max
Glyma.17G236100 1.0kb upstream 1.0kb upstream 3721   true Chr17: 39110396-39114116 Glycine max
Glyma.17G236100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 39110396-39111395 Glycine max
Glyma.17G236100 1.0kb downstream 1.0kb downstream 3721   true Chr17: 39111396-39115116 Glycine max
Glyma.17G236100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 39114117-39115116 Glycine max
Glyma.17G236100 2.0kb upstream 2.0kb upstream 4721   true Chr17: 39109396-39114116 Glycine max
Glyma.17G236100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 39109396-39111395 Glycine max
Glyma.17G236100 2.0kb downstream 2.0kb downstream 4721   true Chr17: 39111396-39116116 Glycine max
Glyma.17G236100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 39114117-39116116 Glycine max
Glyma.17G236100 5.0kb upstream 5.0kb upstream 7721   true Chr17: 39106396-39114116 Glycine max
Glyma.17G236100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 39106396-39111395 Glycine max
Glyma.17G236100 5.0kb downstream 5.0kb downstream 7721   true Chr17: 39111396-39119116 Glycine max
Glyma.17G236100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 39114117-39119116 Glycine max
Glyma.17G236100 10.0kb upstream 10.0kb upstream 12721   true Chr17: 39101396-39114116 Glycine max
Glyma.17G236100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 39101396-39111395 Glycine max
Glyma.17G236100 10.0kb downstream 10.0kb downstream 12721   true Chr17: 39111396-39124116 Glycine max
Glyma.17G236100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 39114117-39124116 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300235 5265 Fabidae View MSA
124070133 5270 Rosid View MSA
123748032 5271 Pentapetalae View MSA
122792151 5272 Eudicot View MSA
122043833 5273 Angiosperm View MSA
121310197 5274 Embryophyte View MSA
123347755 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.56781 0.0 5.42878    
cufflinks 44.9925 0.0 123.438 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.387165 0.0 1.46171    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.103       High
cufflinks 0.723       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.041     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.034     Low  

0 Strain