Gene : Glyma.17G236600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR15138:SF14 - IP01149P-RELATED Genomic Order:  2366
Name:  ? Glyma.17G236600 Secondary Identifier:  ? PAC:30479815
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G236600 0.5kb upstream 0.5kb upstream 10511   true Chr17: 39176681-39187191 Glycine max
Glyma.17G236600 0.5kb upstream 0.5kb upstream 500   false Chr17: 39176681-39177180 Glycine max
Glyma.17G236600 0.5kb downstream 0.5kb downstream 10511   true Chr17: 39177181-39187691 Glycine max
Glyma.17G236600 0.5kb downstream 0.5kb downstream 500   false Chr17: 39187192-39187691 Glycine max
Glyma.17G236600 1.0kb upstream 1.0kb upstream 11011   true Chr17: 39176181-39187191 Glycine max
Glyma.17G236600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 39176181-39177180 Glycine max
Glyma.17G236600 1.0kb downstream 1.0kb downstream 11011   true Chr17: 39177181-39188191 Glycine max
Glyma.17G236600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 39187192-39188191 Glycine max
Glyma.17G236600 2.0kb upstream 2.0kb upstream 12011   true Chr17: 39175181-39187191 Glycine max
Glyma.17G236600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 39175181-39177180 Glycine max
Glyma.17G236600 2.0kb downstream 2.0kb downstream 12011   true Chr17: 39177181-39189191 Glycine max
Glyma.17G236600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 39187192-39189191 Glycine max
Glyma.17G236600 5.0kb upstream 5.0kb upstream 15011   true Chr17: 39172181-39187191 Glycine max
Glyma.17G236600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 39172181-39177180 Glycine max
Glyma.17G236600 5.0kb downstream 5.0kb downstream 15011   true Chr17: 39177181-39192191 Glycine max
Glyma.17G236600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 39187192-39192191 Glycine max
Glyma.17G236600 10.0kb upstream 10.0kb upstream 20011   true Chr17: 39167181-39187191 Glycine max
Glyma.17G236600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 39167181-39177180 Glycine max
Glyma.17G236600 10.0kb downstream 10.0kb downstream 20011   true Chr17: 39177181-39197191 Glycine max
Glyma.17G236600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 39187192-39197191 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303863 5265 Fabidae View MSA
124062302 5270 Rosid View MSA
123738111 5271 Pentapetalae View MSA
122789940 5272 Eudicot View MSA
122043785 5273 Angiosperm View MSA
121346006 5274 Embryophyte View MSA
123428499 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.08777 0.0 17.8631    
cufflinks 8.55068 0.0 29.1326    
cufflinks 11.0166 0.0 37.9107   High
cufflinks 6.2534 0.0 21.5252    
cufflinks 5.31928 0.0 18.6352    
cufflinks 6.21947 0.0 21.4034    
cufflinks 8.31989 0.0 28.3246    
cufflinks 5.17914 0.0 18.3242    
cufflinks 5.89082 0.0 20.3513    
cufflinks 1.114        
cufflinks 1.114        
cufflinks 2.277       High
cufflinks 1.341        
cufflinks 1.448        
cufflinks 1.128        
cufflinks 1.261        
cufflinks 1.017        
cufflinks 2.312       High
cufflinks 2.09       High
cufflinks 1.295        
cufflinks 0.91       Low
cufflinks 1.372        
cufflinks 1.236        
cufflinks 1.207        
cufflinks 1.214        
cufflinks 1.039        

0 Strain