Gene : Glyma.17G236900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR19957//PTHR19957:SF118 - SYNTAXIN Genomic Order:  2369
Name:  ? Glyma.17G236900 Secondary Identifier:  ? PAC:30479521
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G236900 0.5kb upstream 0.5kb upstream 3841   true Chr17: 39209206-39213046 Glycine max
Glyma.17G236900 0.5kb upstream 0.5kb upstream 500   false Chr17: 39209206-39209705 Glycine max
Glyma.17G236900 0.5kb downstream 0.5kb downstream 3841   true Chr17: 39209706-39213546 Glycine max
Glyma.17G236900 0.5kb downstream 0.5kb downstream 500   false Chr17: 39213047-39213546 Glycine max
Glyma.17G236900 1.0kb upstream 1.0kb upstream 4341   true Chr17: 39208706-39213046 Glycine max
Glyma.17G236900 1.0kb upstream 1.0kb upstream 1000   false Chr17: 39208706-39209705 Glycine max
Glyma.17G236900 1.0kb downstream 1.0kb downstream 4341   true Chr17: 39209706-39214046 Glycine max
Glyma.17G236900 1.0kb downstream 1.0kb downstream 1000   false Chr17: 39213047-39214046 Glycine max
Glyma.17G236900 2.0kb upstream 2.0kb upstream 5341   true Chr17: 39207706-39213046 Glycine max
Glyma.17G236900 2.0kb upstream 2.0kb upstream 2000   false Chr17: 39207706-39209705 Glycine max
Glyma.17G236900 2.0kb downstream 2.0kb downstream 5341   true Chr17: 39209706-39215046 Glycine max
Glyma.17G236900 2.0kb downstream 2.0kb downstream 2000   false Chr17: 39213047-39215046 Glycine max
Glyma.17G236900 5.0kb upstream 5.0kb upstream 8341   true Chr17: 39204706-39213046 Glycine max
Glyma.17G236900 5.0kb upstream 5.0kb upstream 5000   false Chr17: 39204706-39209705 Glycine max
Glyma.17G236900 5.0kb downstream 5.0kb downstream 8341   true Chr17: 39209706-39218046 Glycine max
Glyma.17G236900 5.0kb downstream 5.0kb downstream 5000   false Chr17: 39213047-39218046 Glycine max
Glyma.17G236900 10.0kb upstream 10.0kb upstream 13341   true Chr17: 39199706-39213046 Glycine max
Glyma.17G236900 10.0kb upstream 10.0kb upstream 10000   false Chr17: 39199706-39209705 Glycine max
Glyma.17G236900 10.0kb downstream 10.0kb downstream 13341   true Chr17: 39209706-39223046 Glycine max
Glyma.17G236900 10.0kb downstream 10.0kb downstream 10000   false Chr17: 39213047-39223046 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309285 5265 Fabidae View MSA
124064346 5270 Rosid View MSA
123743910 5271 Pentapetalae View MSA
122788324 5272 Eudicot View MSA
122042907 5273 Angiosperm View MSA
121348883 5274 Embryophyte View MSA
123381058 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.5274 0.0 44.0947   High
cufflinks 4.88699 0.0 14.0584    
cufflinks 10.959 0.0 29.4537   High
cufflinks 4.84258 0.0 13.9469    
cufflinks 2.59144 0.0 8.16358   Low
cufflinks 6.44803 0.0 18.024    
cufflinks 3.72548 0.0 11.1532    
cufflinks 3.84467 0.0 11.403    
cufflinks 4.83088 0.0 13.9273    
cufflinks 17.573     High  
cufflinks 42.733     High High
cufflinks 10.03     High  
cufflinks 5.186        
cufflinks 1.875       Low
cufflinks 19.315     High  
cufflinks 7.024        
cufflinks 61.417     High High
cufflinks 7.133        
cufflinks 4.856        
cufflinks 5.961        
cufflinks 35.325     High High
cufflinks 6.443        
cufflinks 6.939        
cufflinks 28.012     High  
cufflinks 6.983     High  
cufflinks 57.524     High High

0 Strain