Gene : Glyma.17G237500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR34362:SF1 - WPP DOMAIN-CONTAINING PROTEIN 1-RELATED Genomic Order:  2375
Name:  ? Glyma.17G237500 Secondary Identifier:  ? PAC:30482523
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G237500 0.5kb upstream 0.5kb upstream 1521   true Chr17: 39274910-39276430 Glycine max
Glyma.17G237500 0.5kb upstream 0.5kb upstream 500   false Chr17: 39274910-39275409 Glycine max
Glyma.17G237500 0.5kb downstream 0.5kb downstream 1521   true Chr17: 39275410-39276930 Glycine max
Glyma.17G237500 0.5kb downstream 0.5kb downstream 500   false Chr17: 39276431-39276930 Glycine max
Glyma.17G237500 1.0kb upstream 1.0kb upstream 2021   true Chr17: 39274410-39276430 Glycine max
Glyma.17G237500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 39274410-39275409 Glycine max
Glyma.17G237500 1.0kb downstream 1.0kb downstream 2021   true Chr17: 39275410-39277430 Glycine max
Glyma.17G237500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 39276431-39277430 Glycine max
Glyma.17G237500 2.0kb upstream 2.0kb upstream 3021   true Chr17: 39273410-39276430 Glycine max
Glyma.17G237500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 39273410-39275409 Glycine max
Glyma.17G237500 2.0kb downstream 2.0kb downstream 3021   true Chr17: 39275410-39278430 Glycine max
Glyma.17G237500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 39276431-39278430 Glycine max
Glyma.17G237500 5.0kb upstream 5.0kb upstream 6021   true Chr17: 39270410-39276430 Glycine max
Glyma.17G237500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 39270410-39275409 Glycine max
Glyma.17G237500 5.0kb downstream 5.0kb downstream 6021   true Chr17: 39275410-39281430 Glycine max
Glyma.17G237500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 39276431-39281430 Glycine max
Glyma.17G237500 10.0kb upstream 10.0kb upstream 11021   true Chr17: 39265410-39276430 Glycine max
Glyma.17G237500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 39265410-39275409 Glycine max
Glyma.17G237500 10.0kb downstream 10.0kb downstream 11021   true Chr17: 39275410-39286430 Glycine max
Glyma.17G237500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 39276431-39286430 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254840 5265 Fabidae View MSA
124061872 5270 Rosid View MSA
123739220 5271 Pentapetalae View MSA
122792231 5272 Eudicot View MSA
122045089 5273 Angiosperm View MSA
121310396 5274 Embryophyte View MSA
123347890 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.33044 0.0 22.6801    
cufflinks 11.0292 0.0 32.3927    
cufflinks 13.6971 0.0 39.5691    
cufflinks 11.1761 0.0 32.8498    
cufflinks 8.37315 0.0 25.1359    
cufflinks 3.29176 0.0 11.2831   Low
cufflinks 22.3853 0.0 60.9135 High High
cufflinks 10.8388 0.0 31.8801    
cufflinks 7.11249 0.0 22.0472    
cufflinks 3.285       High
cufflinks 0.85       Low
cufflinks 3.732       High
cufflinks 1.47        
cufflinks 0.947       Low
cufflinks 1.128        
cufflinks 2.637        
cufflinks 1.648        
cufflinks 3.304       High
cufflinks 2.846        
cufflinks 2.021        
cufflinks 1.07        
cufflinks 1.963        
cufflinks 2.362        
cufflinks 0.782       Low
cufflinks 1.571        
cufflinks 0.856       Low

0 Strain