Gene : Glyma.17G240000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13547:SF3 - PROTEINACEOUS RNASE P 1, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  2400
Name:  ? Glyma.17G240000 Secondary Identifier:  ? PAC:30481844
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G240000 0.5kb upstream 0.5kb upstream 5827   true Chr17: 39548307-39554133 Glycine max
Glyma.17G240000 0.5kb upstream 0.5kb upstream 500   false Chr17: 39553634-39554133 Glycine max
Glyma.17G240000 0.5kb downstream 0.5kb downstream 5827   true Chr17: 39547807-39553633 Glycine max
Glyma.17G240000 0.5kb downstream 0.5kb downstream 500   false Chr17: 39547807-39548306 Glycine max
Glyma.17G240000 1.0kb upstream 1.0kb upstream 6327   true Chr17: 39548307-39554633 Glycine max
Glyma.17G240000 1.0kb upstream 1.0kb upstream 1000   false Chr17: 39553634-39554633 Glycine max
Glyma.17G240000 1.0kb downstream 1.0kb downstream 6327   true Chr17: 39547307-39553633 Glycine max
Glyma.17G240000 1.0kb downstream 1.0kb downstream 1000   false Chr17: 39547307-39548306 Glycine max
Glyma.17G240000 2.0kb upstream 2.0kb upstream 7327   true Chr17: 39548307-39555633 Glycine max
Glyma.17G240000 2.0kb upstream 2.0kb upstream 2000   false Chr17: 39553634-39555633 Glycine max
Glyma.17G240000 2.0kb downstream 2.0kb downstream 7327   true Chr17: 39546307-39553633 Glycine max
Glyma.17G240000 2.0kb downstream 2.0kb downstream 2000   false Chr17: 39546307-39548306 Glycine max
Glyma.17G240000 5.0kb upstream 5.0kb upstream 10327   true Chr17: 39548307-39558633 Glycine max
Glyma.17G240000 5.0kb upstream 5.0kb upstream 5000   false Chr17: 39553634-39558633 Glycine max
Glyma.17G240000 5.0kb downstream 5.0kb downstream 10327   true Chr17: 39543307-39553633 Glycine max
Glyma.17G240000 5.0kb downstream 5.0kb downstream 5000   false Chr17: 39543307-39548306 Glycine max
Glyma.17G240000 10.0kb upstream 10.0kb upstream 15327   true Chr17: 39548307-39563633 Glycine max
Glyma.17G240000 10.0kb upstream 10.0kb upstream 10000   false Chr17: 39553634-39563633 Glycine max
Glyma.17G240000 10.0kb downstream 10.0kb downstream 15327   true Chr17: 39538307-39553633 Glycine max
Glyma.17G240000 10.0kb downstream 10.0kb downstream 10000   false Chr17: 39538307-39548306 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299147 5265 Fabidae View MSA
124064594 5270 Rosid View MSA
123746392 5271 Pentapetalae View MSA
122788883 5272 Eudicot View MSA
122048517 5273 Angiosperm View MSA
121348403 5274 Embryophyte View MSA
123426144 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.87464 0.0 21.1706   High
cufflinks 3.78085 0.0 10.7513    
cufflinks 3.03995 0.0 8.87021    
cufflinks 4.36779 0.0 12.223    
cufflinks 3.57672 0.0 10.2196    
cufflinks 2.44236 0.0 7.33066   Low
cufflinks 4.21501 0.0 11.8396    
cufflinks 3.73119 0.0 10.6195    
cufflinks 3.64533 0.0 10.3972    
cufflinks 2.976        
cufflinks 0.547       Low
cufflinks 2.914        
cufflinks 1.788        
cufflinks 2.205        
cufflinks 0.57       Low
cufflinks 3.95        
cufflinks 0.659       Low
cufflinks 3.118        
cufflinks 2.622        
cufflinks 4.373       High
cufflinks 0.644       Low
cufflinks 4.198        
cufflinks 5.13       High
cufflinks 0.663       Low
cufflinks 4.495       High
cufflinks 0.677       Low

0 Strain