Gene : Glyma.18G021300 G. max Wm82.a2.v1
Defline:  (1 of 32) PF05701 - Weak chloroplast movement under blue light (WEMBL) Genomic Order:  213
Name:  ? Glyma.18G021300 Secondary Identifier:  ? PAC:30556629
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G021300 0.5kb upstream 0.5kb upstream 3783 true Chr18: 1561947-1565729 Glycine max
Glyma.18G021300 0.5kb upstream 0.5kb upstream 500 false Chr18: 1561947-1562446 Glycine max
Glyma.18G021300 0.5kb downstream 0.5kb downstream 3783 true Chr18: 1562447-1566229 Glycine max
Glyma.18G021300 0.5kb downstream 0.5kb downstream 500 false Chr18: 1565730-1566229 Glycine max
Glyma.18G021300 1.0kb upstream 1.0kb upstream 4283 true Chr18: 1561447-1565729 Glycine max
Glyma.18G021300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 1561447-1562446 Glycine max
Glyma.18G021300 1.0kb downstream 1.0kb downstream 4283 true Chr18: 1562447-1566729 Glycine max
Glyma.18G021300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 1565730-1566729 Glycine max
Glyma.18G021300 2.0kb upstream 2.0kb upstream 5283 true Chr18: 1560447-1565729 Glycine max
Glyma.18G021300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 1560447-1562446 Glycine max
Glyma.18G021300 2.0kb downstream 2.0kb downstream 5283 true Chr18: 1562447-1567729 Glycine max
Glyma.18G021300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 1565730-1567729 Glycine max
Glyma.18G021300 5.0kb upstream 5.0kb upstream 8283 true Chr18: 1557447-1565729 Glycine max
Glyma.18G021300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 1557447-1562446 Glycine max
Glyma.18G021300 5.0kb downstream 5.0kb downstream 8283 true Chr18: 1562447-1570729 Glycine max
Glyma.18G021300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 1565730-1570729 Glycine max
Glyma.18G021300 10.0kb upstream 10.0kb upstream 13283 true Chr18: 1552447-1565729 Glycine max
Glyma.18G021300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 1552447-1562446 Glycine max
Glyma.18G021300 10.0kb downstream 10.0kb downstream 13283 true Chr18: 1562447-1575729 Glycine max
Glyma.18G021300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 1565730-1575729 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311786 5265 Fabidae View MSA
124068222 5270 Rosid View MSA
123738917 5271 Pentapetalae View MSA
122794264 5272 Eudicot View MSA
122043460 5273 Angiosperm View MSA
121351750 5274 Embryophyte View MSA
123382308 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.83506 0.0 10.7874    
cufflinks 2.88534 0.0 8.39047    
cufflinks 2.58951 0.0 7.62895    
cufflinks 12.62 0.0 33.7262   High
cufflinks 3.27268 0.0 9.36312    
cufflinks 3.30759 0.0 9.45316    
cufflinks 2.20969 0.0 6.66509    
cufflinks 21.7508 0.0 59.6657 High High
cufflinks 6.33188 0.0 17.1294    
cufflinks 14.418     High High
cufflinks 3.608        
cufflinks 2.798       Low
cufflinks 3.642        
cufflinks 1.47       Low
cufflinks 2.784       Low
cufflinks 6.459        
cufflinks 5.351        
cufflinks 4.215        
cufflinks 6.278        
cufflinks 6.649        
cufflinks 6.327     High  
cufflinks 7.759     High  
cufflinks 6.434        
cufflinks 4.132        
cufflinks 6.827        
cufflinks 3.542        

0 Strain