Gene : Glyma.18G022000 G. max Wm82.a2.v1
Defline:  (1 of 6) PF04588 - Hypoxia induced protein conserved region (HIG_1_N) Genomic Order:  220
Name:  ? Glyma.18G022000 Secondary Identifier:  ? PAC:30555368
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G022000 0.5kb upstream 0.5kb upstream 1602 true Chr18: 1612672-1614273 Glycine max
Glyma.18G022000 0.5kb upstream 0.5kb upstream 500 false Chr18: 1612672-1613171 Glycine max
Glyma.18G022000 0.5kb downstream 0.5kb downstream 1602 true Chr18: 1613172-1614773 Glycine max
Glyma.18G022000 0.5kb downstream 0.5kb downstream 500 false Chr18: 1614274-1614773 Glycine max
Glyma.18G022000 1.0kb upstream 1.0kb upstream 2102 true Chr18: 1612172-1614273 Glycine max
Glyma.18G022000 1.0kb upstream 1.0kb upstream 1000 false Chr18: 1612172-1613171 Glycine max
Glyma.18G022000 1.0kb downstream 1.0kb downstream 2102 true Chr18: 1613172-1615273 Glycine max
Glyma.18G022000 1.0kb downstream 1.0kb downstream 1000 false Chr18: 1614274-1615273 Glycine max
Glyma.18G022000 2.0kb upstream 2.0kb upstream 3102 true Chr18: 1611172-1614273 Glycine max
Glyma.18G022000 2.0kb upstream 2.0kb upstream 2000 false Chr18: 1611172-1613171 Glycine max
Glyma.18G022000 2.0kb downstream 2.0kb downstream 3102 true Chr18: 1613172-1616273 Glycine max
Glyma.18G022000 2.0kb downstream 2.0kb downstream 2000 false Chr18: 1614274-1616273 Glycine max
Glyma.18G022000 5.0kb upstream 5.0kb upstream 6102 true Chr18: 1608172-1614273 Glycine max
Glyma.18G022000 5.0kb upstream 5.0kb upstream 5000 false Chr18: 1608172-1613171 Glycine max
Glyma.18G022000 5.0kb downstream 5.0kb downstream 6102 true Chr18: 1613172-1619273 Glycine max
Glyma.18G022000 5.0kb downstream 5.0kb downstream 5000 false Chr18: 1614274-1619273 Glycine max
Glyma.18G022000 10.0kb upstream 10.0kb upstream 11102 true Chr18: 1603172-1614273 Glycine max
Glyma.18G022000 10.0kb upstream 10.0kb upstream 10000 false Chr18: 1603172-1613171 Glycine max
Glyma.18G022000 10.0kb downstream 10.0kb downstream 11102 true Chr18: 1613172-1624273 Glycine max
Glyma.18G022000 10.0kb downstream 10.0kb downstream 10000 false Chr18: 1614274-1624273 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310743 5265 Fabidae View MSA
124071085 5270 Rosid View MSA
123747156 5271 Pentapetalae View MSA
122795420 5272 Eudicot View MSA
122049658 5273 Angiosperm View MSA
123428942 5275 Viridiplantae View MSA
121349742 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.240108 0.0 0.951136    
cufflinks 0.122735 0.0 0.499472 Low  
cufflinks 0.116728 0.0 0.475903 Low  
cufflinks 0.198532 0.0 0.790477 Low  
cufflinks 2.42304 0.0 8.55521   High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 27.928     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.187       Low
cufflinks 5.987        
cufflinks 12.325     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 10.702     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 75.175     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low Low
cufflinks 18.543     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 45.076     High  

0 Strain