Gene : Glyma.18G022600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31045:SF4 - (Z)-GAMMA-BISABOLENE SYNTHASE 1-RELATED Genomic Order:  226
Name:  ? Glyma.18G022600 Secondary Identifier:  ? PAC:30556144
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G022600 0.5kb upstream 0.5kb upstream 2168 true Chr18: 1647002-1649169 Glycine max
Glyma.18G022600 0.5kb upstream 0.5kb upstream 500 false Chr18: 1647002-1647501 Glycine max
Glyma.18G022600 0.5kb downstream 0.5kb downstream 2168 true Chr18: 1647502-1649669 Glycine max
Glyma.18G022600 0.5kb downstream 0.5kb downstream 500 false Chr18: 1649170-1649669 Glycine max
Glyma.18G022600 1.0kb upstream 1.0kb upstream 2668 true Chr18: 1646502-1649169 Glycine max
Glyma.18G022600 1.0kb upstream 1.0kb upstream 1000 false Chr18: 1646502-1647501 Glycine max
Glyma.18G022600 1.0kb downstream 1.0kb downstream 2668 true Chr18: 1647502-1650169 Glycine max
Glyma.18G022600 1.0kb downstream 1.0kb downstream 1000 false Chr18: 1649170-1650169 Glycine max
Glyma.18G022600 2.0kb upstream 2.0kb upstream 3668 true Chr18: 1645502-1649169 Glycine max
Glyma.18G022600 2.0kb upstream 2.0kb upstream 2000 false Chr18: 1645502-1647501 Glycine max
Glyma.18G022600 2.0kb downstream 2.0kb downstream 3668 true Chr18: 1647502-1651169 Glycine max
Glyma.18G022600 2.0kb downstream 2.0kb downstream 2000 false Chr18: 1649170-1651169 Glycine max
Glyma.18G022600 5.0kb upstream 5.0kb upstream 6668 true Chr18: 1642502-1649169 Glycine max
Glyma.18G022600 5.0kb upstream 5.0kb upstream 5000 false Chr18: 1642502-1647501 Glycine max
Glyma.18G022600 5.0kb downstream 5.0kb downstream 6668 true Chr18: 1647502-1654169 Glycine max
Glyma.18G022600 5.0kb downstream 5.0kb downstream 5000 false Chr18: 1649170-1654169 Glycine max
Glyma.18G022600 10.0kb upstream 10.0kb upstream 11668 true Chr18: 1637502-1649169 Glycine max
Glyma.18G022600 10.0kb upstream 10.0kb upstream 10000 false Chr18: 1637502-1647501 Glycine max
Glyma.18G022600 10.0kb downstream 10.0kb downstream 11668 true Chr18: 1647502-1659169 Glycine max
Glyma.18G022600 10.0kb downstream 10.0kb downstream 10000 false Chr18: 1649170-1659169 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254179 5265 Fabidae View MSA
123996461 5270 Rosid View MSA
123744852 5271 Pentapetalae View MSA
122790012 5272 Eudicot View MSA
122046321 5273 Angiosperm View MSA
121349634 5274 Embryophyte View MSA
123381382 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.267533 0.0 1.0264    
cufflinks 0.228175 0.0 0.881153 Low  
cufflinks 0.432013 0.0 1.61943    
cufflinks 0.442029 0.0 1.65681    
cufflinks 0.177186 0.0 0.691896 Low  
cufflinks 0.136095 0.0 0.536228 Low  
cufflinks 3.39579 0.0 10.6494   High
cufflinks 0.415981 0.0 1.5633    
cufflinks 0.131366 0.0 0.518246 Low  
cufflinks 0.34       High
cufflinks 0.149        
cufflinks 0.71       High
cufflinks 0.258        
cufflinks 0.12        
cufflinks 0.148        
cufflinks 0.145        
cufflinks 0.14        
cufflinks 0.461       High
cufflinks 0.255        
cufflinks 0.065     Low Low
cufflinks 0.088       Low
cufflinks 0.11        
cufflinks 0.231        
cufflinks 0.141        
cufflinks 0.133        
cufflinks 0.122        

0 Strain