Gene : Glyma.18G023600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11709:SF22 - LACCASE-12-RELATED Genomic Order:  236
Name:  ? Glyma.18G023600 Secondary Identifier:  ? PAC:30555255
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5466 Glycine max pathologic  
Gmax PWY-6824 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G023600 0.5kb upstream 0.5kb upstream 5556 true Chr18: 1722909-1728464 Glycine max
Glyma.18G023600 0.5kb upstream 0.5kb upstream 500 false Chr18: 1722909-1723408 Glycine max
Glyma.18G023600 0.5kb downstream 0.5kb downstream 5556 true Chr18: 1723409-1728964 Glycine max
Glyma.18G023600 0.5kb downstream 0.5kb downstream 500 false Chr18: 1728465-1728964 Glycine max
Glyma.18G023600 1.0kb upstream 1.0kb upstream 6056 true Chr18: 1722409-1728464 Glycine max
Glyma.18G023600 1.0kb upstream 1.0kb upstream 1000 false Chr18: 1722409-1723408 Glycine max
Glyma.18G023600 1.0kb downstream 1.0kb downstream 6056 true Chr18: 1723409-1729464 Glycine max
Glyma.18G023600 1.0kb downstream 1.0kb downstream 1000 false Chr18: 1728465-1729464 Glycine max
Glyma.18G023600 2.0kb upstream 2.0kb upstream 7056 true Chr18: 1721409-1728464 Glycine max
Glyma.18G023600 2.0kb upstream 2.0kb upstream 2000 false Chr18: 1721409-1723408 Glycine max
Glyma.18G023600 2.0kb downstream 2.0kb downstream 7056 true Chr18: 1723409-1730464 Glycine max
Glyma.18G023600 2.0kb downstream 2.0kb downstream 2000 false Chr18: 1728465-1730464 Glycine max
Glyma.18G023600 5.0kb upstream 5.0kb upstream 10056 true Chr18: 1718409-1728464 Glycine max
Glyma.18G023600 5.0kb upstream 5.0kb upstream 5000 false Chr18: 1718409-1723408 Glycine max
Glyma.18G023600 5.0kb downstream 5.0kb downstream 10056 true Chr18: 1723409-1733464 Glycine max
Glyma.18G023600 5.0kb downstream 5.0kb downstream 5000 false Chr18: 1728465-1733464 Glycine max
Glyma.18G023600 10.0kb upstream 10.0kb upstream 15056 true Chr18: 1713409-1728464 Glycine max
Glyma.18G023600 10.0kb upstream 10.0kb upstream 10000 false Chr18: 1713409-1723408 Glycine max
Glyma.18G023600 10.0kb downstream 10.0kb downstream 15056 true Chr18: 1723409-1738464 Glycine max
Glyma.18G023600 10.0kb downstream 10.0kb downstream 10000 false Chr18: 1728465-1738464 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254154 5265 Fabidae View MSA
123996446 5270 Rosid View MSA
123746086 5271 Pentapetalae View MSA
122788360 5272 Eudicot View MSA
122044394 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.14749 0.0 6.71597    
cufflinks 0.368499 0.0 1.36508    
cufflinks 1.1624 0.0 3.96877    
cufflinks 131.307 0.0 461.027 High High
cufflinks 5.1544 0.0 14.3707    
cufflinks 2.01994 0.0 6.36223    
cufflinks 0.0157034 0.0 0.0676332 Low Low
cufflinks 31.122 0.0 86.2885 High High
cufflinks 3.85343 0.0 11.1157    
cufflinks 7.826     High High
cufflinks 0.086       Low
cufflinks 0.115     Low  
cufflinks 2.422       High
cufflinks 0.349        
cufflinks 0.036     Low Low
cufflinks 0.136        
cufflinks 1.312       High
cufflinks 0.342        
cufflinks 0.91        
cufflinks 0.153        
cufflinks 0.344        
cufflinks 0.208        
cufflinks 0.378        
cufflinks 0.174        
cufflinks 0.238        
cufflinks 0.52        

0 Strain