Gene : Glyma.18G024200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR24031:SF2 - ATP-DEPENDENT RNA HELICASE DDX55 Genomic Order:  242
Name:  ? Glyma.18G024200 Secondary Identifier:  ? PAC:30557293
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G024200 0.5kb upstream 0.5kb upstream 5928 true Chr18: 1783971-1789898 Glycine max
Glyma.18G024200 0.5kb upstream 0.5kb upstream 500 false Chr18: 1783971-1784470 Glycine max
Glyma.18G024200 0.5kb downstream 0.5kb downstream 5928 true Chr18: 1784471-1790398 Glycine max
Glyma.18G024200 0.5kb downstream 0.5kb downstream 500 false Chr18: 1789899-1790398 Glycine max
Glyma.18G024200 1.0kb upstream 1.0kb upstream 6428 true Chr18: 1783471-1789898 Glycine max
Glyma.18G024200 1.0kb upstream 1.0kb upstream 1000 false Chr18: 1783471-1784470 Glycine max
Glyma.18G024200 1.0kb downstream 1.0kb downstream 6428 true Chr18: 1784471-1790898 Glycine max
Glyma.18G024200 1.0kb downstream 1.0kb downstream 1000 false Chr18: 1789899-1790898 Glycine max
Glyma.18G024200 2.0kb upstream 2.0kb upstream 7428 true Chr18: 1782471-1789898 Glycine max
Glyma.18G024200 2.0kb upstream 2.0kb upstream 2000 false Chr18: 1782471-1784470 Glycine max
Glyma.18G024200 2.0kb downstream 2.0kb downstream 7428 true Chr18: 1784471-1791898 Glycine max
Glyma.18G024200 2.0kb downstream 2.0kb downstream 2000 false Chr18: 1789899-1791898 Glycine max
Glyma.18G024200 5.0kb upstream 5.0kb upstream 10428 true Chr18: 1779471-1789898 Glycine max
Glyma.18G024200 5.0kb upstream 5.0kb upstream 5000 false Chr18: 1779471-1784470 Glycine max
Glyma.18G024200 5.0kb downstream 5.0kb downstream 10428 true Chr18: 1784471-1794898 Glycine max
Glyma.18G024200 5.0kb downstream 5.0kb downstream 5000 false Chr18: 1789899-1794898 Glycine max
Glyma.18G024200 10.0kb upstream 10.0kb upstream 15428 true Chr18: 1774471-1789898 Glycine max
Glyma.18G024200 10.0kb upstream 10.0kb upstream 10000 false Chr18: 1774471-1784470 Glycine max
Glyma.18G024200 10.0kb downstream 10.0kb downstream 15428 true Chr18: 1784471-1799898 Glycine max
Glyma.18G024200 10.0kb downstream 10.0kb downstream 10000 false Chr18: 1789899-1799898 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306552 5265 Fabidae View MSA
124068016 5270 Rosid View MSA
123739491 5271 Pentapetalae View MSA
122792074 5272 Eudicot View MSA
122042767 5273 Angiosperm View MSA
123429160 5275 Viridiplantae View MSA
121346858 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.60138 0.0 23.0315   High
cufflinks 6.25489 0.0 16.9705    
cufflinks 3.86688 0.0 10.9002   Low
cufflinks 5.83716 0.0 15.8953    
cufflinks 7.50964 0.0 20.1994    
cufflinks 5.07026 0.0 13.9637    
cufflinks 9.84868 0.0 26.3016   High
cufflinks 4.94626 0.0 13.6228    
cufflinks 5.58054 0.0 15.2474    
cufflinks 1.683       Low
cufflinks 2.591        
cufflinks 2.745        
cufflinks 4.144       High
cufflinks 5.641       High
cufflinks 2.79        
cufflinks 2.653        
cufflinks 1.506       Low
cufflinks 2.363        
cufflinks 3.012        
cufflinks 2.798        
cufflinks 3.218        
cufflinks 2.59        
cufflinks 3.174        
cufflinks 2.742        
cufflinks 2.817        
cufflinks 2.382        

0 Strain