Gene : Glyma.18G024400 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31301:SF4 - LOB DOMAIN-CONTAINING PROTEIN 12 Genomic Order:  244
Name:  ? Glyma.18G024400 Secondary Identifier:  ? PAC:30557067
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G024400 0.5kb upstream 0.5kb upstream 1484 true Chr18: 1810774-1812257 Glycine max
Glyma.18G024400 0.5kb upstream 0.5kb upstream 500 false Chr18: 1811758-1812257 Glycine max
Glyma.18G024400 0.5kb downstream 0.5kb downstream 1484 true Chr18: 1810274-1811757 Glycine max
Glyma.18G024400 0.5kb downstream 0.5kb downstream 500 false Chr18: 1810274-1810773 Glycine max
Glyma.18G024400 1.0kb upstream 1.0kb upstream 1984 true Chr18: 1810774-1812757 Glycine max
Glyma.18G024400 1.0kb upstream 1.0kb upstream 1000 false Chr18: 1811758-1812757 Glycine max
Glyma.18G024400 1.0kb downstream 1.0kb downstream 1984 true Chr18: 1809774-1811757 Glycine max
Glyma.18G024400 1.0kb downstream 1.0kb downstream 1000 false Chr18: 1809774-1810773 Glycine max
Glyma.18G024400 2.0kb upstream 2.0kb upstream 2984 true Chr18: 1810774-1813757 Glycine max
Glyma.18G024400 2.0kb upstream 2.0kb upstream 2000 false Chr18: 1811758-1813757 Glycine max
Glyma.18G024400 2.0kb downstream 2.0kb downstream 2984 true Chr18: 1808774-1811757 Glycine max
Glyma.18G024400 2.0kb downstream 2.0kb downstream 2000 false Chr18: 1808774-1810773 Glycine max
Glyma.18G024400 5.0kb upstream 5.0kb upstream 5984 true Chr18: 1810774-1816757 Glycine max
Glyma.18G024400 5.0kb upstream 5.0kb upstream 5000 false Chr18: 1811758-1816757 Glycine max
Glyma.18G024400 5.0kb downstream 5.0kb downstream 5984 true Chr18: 1805774-1811757 Glycine max
Glyma.18G024400 5.0kb downstream 5.0kb downstream 5000 false Chr18: 1805774-1810773 Glycine max
Glyma.18G024400 10.0kb upstream 10.0kb upstream 10984 true Chr18: 1810774-1821757 Glycine max
Glyma.18G024400 10.0kb upstream 10.0kb upstream 10000 false Chr18: 1811758-1821757 Glycine max
Glyma.18G024400 10.0kb downstream 10.0kb downstream 10984 true Chr18: 1800774-1811757 Glycine max
Glyma.18G024400 10.0kb downstream 10.0kb downstream 10000 false Chr18: 1800774-1810773 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307046 5265 Fabidae View MSA
124071000 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.580393 0.0 2.23232    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.01554 0.0 3.8105    
cufflinks 0.552232 0.0 2.12784    
cufflinks 0.455545 0.0 1.76945    
cufflinks 1.467 0.0 5.40681   High
cufflinks 0.358351 0.0 1.4058    
cufflinks 0.196895 0.0 0.788478 Low Low
cufflinks 0.871914 0.0 3.29184    
cufflinks 0.247        
cufflinks 2.039        
cufflinks 3.263        
cufflinks 2.076        
cufflinks 0.903        
cufflinks 7.811     High High
cufflinks 0.838        
cufflinks 1.431        
cufflinks 1.029        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.195       Low
cufflinks 10.853     High High
cufflinks 0.182       Low
cufflinks 0.19       Low
cufflinks 5.922       High
cufflinks 0.069     Low Low
cufflinks 6.271       High

0 Strain