Gene : Glyma.18G026000 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR10292 - CLATHRIN HEAVY CHAIN Genomic Order:  260
Name:  ? Glyma.18G026000 Secondary Identifier:  ? PAC:30555256
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G026000 0.5kb upstream 0.5kb upstream 13000 true Chr18: 1932330-1945329 Glycine max
Glyma.18G026000 0.5kb upstream 0.5kb upstream 500 false Chr18: 1944830-1945329 Glycine max
Glyma.18G026000 0.5kb downstream 0.5kb downstream 13000 true Chr18: 1931830-1944829 Glycine max
Glyma.18G026000 0.5kb downstream 0.5kb downstream 500 false Chr18: 1931830-1932329 Glycine max
Glyma.18G026000 1.0kb upstream 1.0kb upstream 13500 true Chr18: 1932330-1945829 Glycine max
Glyma.18G026000 1.0kb upstream 1.0kb upstream 1000 false Chr18: 1944830-1945829 Glycine max
Glyma.18G026000 1.0kb downstream 1.0kb downstream 13500 true Chr18: 1931330-1944829 Glycine max
Glyma.18G026000 1.0kb downstream 1.0kb downstream 1000 false Chr18: 1931330-1932329 Glycine max
Glyma.18G026000 2.0kb upstream 2.0kb upstream 14500 true Chr18: 1932330-1946829 Glycine max
Glyma.18G026000 2.0kb upstream 2.0kb upstream 2000 false Chr18: 1944830-1946829 Glycine max
Glyma.18G026000 2.0kb downstream 2.0kb downstream 14500 true Chr18: 1930330-1944829 Glycine max
Glyma.18G026000 2.0kb downstream 2.0kb downstream 2000 false Chr18: 1930330-1932329 Glycine max
Glyma.18G026000 5.0kb upstream 5.0kb upstream 17500 true Chr18: 1932330-1949829 Glycine max
Glyma.18G026000 5.0kb upstream 5.0kb upstream 5000 false Chr18: 1944830-1949829 Glycine max
Glyma.18G026000 5.0kb downstream 5.0kb downstream 17500 true Chr18: 1927330-1944829 Glycine max
Glyma.18G026000 5.0kb downstream 5.0kb downstream 5000 false Chr18: 1927330-1932329 Glycine max
Glyma.18G026000 10.0kb upstream 10.0kb upstream 22500 true Chr18: 1932330-1954829 Glycine max
Glyma.18G026000 10.0kb upstream 10.0kb upstream 10000 false Chr18: 1944830-1954829 Glycine max
Glyma.18G026000 10.0kb downstream 10.0kb downstream 22500 true Chr18: 1922330-1944829 Glycine max
Glyma.18G026000 10.0kb downstream 10.0kb downstream 10000 false Chr18: 1922330-1932329 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027117 5273 Angiosperm View MSA
122311720 5265 Fabidae View MSA
124064401 5270 Rosid View MSA
123744166 5271 Pentapetalae View MSA
122788856 5272 Eudicot View MSA
121350817 5274 Embryophyte View MSA
123428843 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.8478 0.0 51.8297    
cufflinks 15.9906 0.0 45.8207    
cufflinks 12.1162 0.0 33.7513   Low
cufflinks 23.2907 0.0 70.4702 High  
cufflinks 32.7495 0.0 104.86 High High
cufflinks 19.974 0.0 58.9951    
cufflinks 14.2273 0.0 40.0871   Low
cufflinks 27.9961 0.0 87.4497 High High
cufflinks 19.8492 0.0 58.609 High  
cufflinks 21.816     High High
cufflinks 3.924       Low
cufflinks 8.393     High  
cufflinks 23.651     High High
cufflinks 28.619     High High
cufflinks 3.087       Low
cufflinks 8.069     High  
cufflinks 8.184     High  
cufflinks 13.789     High  
cufflinks 12.556     High  
cufflinks 6.051        
cufflinks 7.391     High  
cufflinks 7.356     High  
cufflinks 8.793     High  
cufflinks 6.167     High  
cufflinks 6.105        
cufflinks 7.171     High  

0 Strain