Gene : Glyma.18G027400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11071//PTHR11071:SF291 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE Genomic Order:  274
Name:  ? Glyma.18G027400 Secondary Identifier:  ? PAC:30554678
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G027400 0.5kb upstream 0.5kb upstream 3399 true Chr18: 2059886-2063284 Glycine max
Glyma.18G027400 0.5kb upstream 0.5kb upstream 500 false Chr18: 2059886-2060385 Glycine max
Glyma.18G027400 0.5kb downstream 0.5kb downstream 3399 true Chr18: 2060386-2063784 Glycine max
Glyma.18G027400 0.5kb downstream 0.5kb downstream 500 false Chr18: 2063285-2063784 Glycine max
Glyma.18G027400 1.0kb upstream 1.0kb upstream 3899 true Chr18: 2059386-2063284 Glycine max
Glyma.18G027400 1.0kb upstream 1.0kb upstream 1000 false Chr18: 2059386-2060385 Glycine max
Glyma.18G027400 1.0kb downstream 1.0kb downstream 3899 true Chr18: 2060386-2064284 Glycine max
Glyma.18G027400 1.0kb downstream 1.0kb downstream 1000 false Chr18: 2063285-2064284 Glycine max
Glyma.18G027400 2.0kb upstream 2.0kb upstream 4899 true Chr18: 2058386-2063284 Glycine max
Glyma.18G027400 2.0kb upstream 2.0kb upstream 2000 false Chr18: 2058386-2060385 Glycine max
Glyma.18G027400 2.0kb downstream 2.0kb downstream 4899 true Chr18: 2060386-2065284 Glycine max
Glyma.18G027400 2.0kb downstream 2.0kb downstream 2000 false Chr18: 2063285-2065284 Glycine max
Glyma.18G027400 5.0kb upstream 5.0kb upstream 7899 true Chr18: 2055386-2063284 Glycine max
Glyma.18G027400 5.0kb upstream 5.0kb upstream 5000 false Chr18: 2055386-2060385 Glycine max
Glyma.18G027400 5.0kb downstream 5.0kb downstream 7899 true Chr18: 2060386-2068284 Glycine max
Glyma.18G027400 5.0kb downstream 5.0kb downstream 5000 false Chr18: 2063285-2068284 Glycine max
Glyma.18G027400 10.0kb upstream 10.0kb upstream 12899 true Chr18: 2050386-2063284 Glycine max
Glyma.18G027400 10.0kb upstream 10.0kb upstream 10000 false Chr18: 2050386-2060385 Glycine max
Glyma.18G027400 10.0kb downstream 10.0kb downstream 12899 true Chr18: 2060386-2073284 Glycine max
Glyma.18G027400 10.0kb downstream 10.0kb downstream 10000 false Chr18: 2063285-2073284 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311388 5265 Fabidae View MSA
124064129 5270 Rosid View MSA
123745258 5271 Pentapetalae View MSA
122785870 5272 Eudicot View MSA
122041792 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121346769 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.62225 0.0 8.9103   Low
cufflinks 13.6385 0.0 37.6554    
cufflinks 10.7886 0.0 30.357    
cufflinks 11.5294 0.0 32.2612    
cufflinks 10.8791 0.0 30.6583    
cufflinks 13.2084 0.0 36.5226    
cufflinks 13.8357 0.0 38.1379    
cufflinks 10.8473 0.0 30.5618    
cufflinks 10.2451 0.0 29.0679    
cufflinks 4.436       High
cufflinks 0.795       Low
cufflinks 4.527       High
cufflinks 4.649       High
cufflinks 6.654       High
cufflinks 1.159        
cufflinks 2.103        
cufflinks 1.21        
cufflinks 4.704       High
cufflinks 4.858       High
cufflinks 1.313        
cufflinks 1.145        
cufflinks 1.608        
cufflinks 1.769        
cufflinks 1.261        
cufflinks 1.52        
cufflinks 1.12        

0 Strain