Gene : Glyma.18G015700 G. max Wm82.a2.v1
Defline:  (1 of 42) KOG0087 - GTPase Rab11/YPT3, small G protein superfamily Genomic Order:  157
Name:  ? Glyma.18G015700 Secondary Identifier:  ? PAC:30558003
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G015700 0.5kb upstream 0.5kb upstream 3914 true Chr18: 1114239-1118152 Glycine max
Glyma.18G015700 0.5kb upstream 0.5kb upstream 500 false Chr18: 1117653-1118152 Glycine max
Glyma.18G015700 0.5kb downstream 0.5kb downstream 3914 true Chr18: 1113739-1117652 Glycine max
Glyma.18G015700 0.5kb downstream 0.5kb downstream 500 false Chr18: 1113739-1114238 Glycine max
Glyma.18G015700 1.0kb upstream 1.0kb upstream 4414 true Chr18: 1114239-1118652 Glycine max
Glyma.18G015700 1.0kb upstream 1.0kb upstream 1000 false Chr18: 1117653-1118652 Glycine max
Glyma.18G015700 1.0kb downstream 1.0kb downstream 4414 true Chr18: 1113239-1117652 Glycine max
Glyma.18G015700 1.0kb downstream 1.0kb downstream 1000 false Chr18: 1113239-1114238 Glycine max
Glyma.18G015700 2.0kb upstream 2.0kb upstream 5414 true Chr18: 1114239-1119652 Glycine max
Glyma.18G015700 2.0kb upstream 2.0kb upstream 2000 false Chr18: 1117653-1119652 Glycine max
Glyma.18G015700 2.0kb downstream 2.0kb downstream 5414 true Chr18: 1112239-1117652 Glycine max
Glyma.18G015700 2.0kb downstream 2.0kb downstream 2000 false Chr18: 1112239-1114238 Glycine max
Glyma.18G015700 5.0kb upstream 5.0kb upstream 8414 true Chr18: 1114239-1122652 Glycine max
Glyma.18G015700 5.0kb upstream 5.0kb upstream 5000 false Chr18: 1117653-1122652 Glycine max
Glyma.18G015700 5.0kb downstream 5.0kb downstream 8414 true Chr18: 1109239-1117652 Glycine max
Glyma.18G015700 5.0kb downstream 5.0kb downstream 5000 false Chr18: 1109239-1114238 Glycine max
Glyma.18G015700 10.0kb upstream 10.0kb upstream 13414 true Chr18: 1114239-1127652 Glycine max
Glyma.18G015700 10.0kb upstream 10.0kb upstream 10000 false Chr18: 1117653-1127652 Glycine max
Glyma.18G015700 10.0kb downstream 10.0kb downstream 13414 true Chr18: 1104239-1117652 Glycine max
Glyma.18G015700 10.0kb downstream 10.0kb downstream 10000 false Chr18: 1104239-1114238 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312719 5265 Fabidae View MSA
124067588 5270 Rosid View MSA
123750991 5271 Pentapetalae View MSA
122787491 5272 Eudicot View MSA
122047606 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.22032 0.0 20.958    
cufflinks 10.5093 0.0 29.2592    
cufflinks 2.85638 0.0 9.44147   Low
cufflinks 12.8358 0.0 35.1038    
cufflinks 14.6993 0.0 39.8714    
cufflinks 8.37336 0.0 23.8751    
cufflinks 5.48114 0.0 16.506    
cufflinks 18.4612 0.0 49.544   High
cufflinks 9.22153 0.0 25.9992    
cufflinks 10.65     High High
cufflinks 1.993       Low
cufflinks 2.529        
cufflinks 5.515        
cufflinks 7.339     High High
cufflinks 2.892        
cufflinks 4.872        
cufflinks 5.395        
cufflinks 4.601        
cufflinks 3.971        
cufflinks 4.574        
cufflinks 1.77       Low
cufflinks 4.522        
cufflinks 5.92        
cufflinks 0.958       Low
cufflinks 4.128        
cufflinks 3.358        

0 Strain