Gene : Glyma.18G016700 G. max Wm82.a2.v1
Defline:  (1 of 14) PTHR10593//PTHR10593:SF41 - SERINE/THREONINE-PROTEIN KINASE RIO Genomic Order:  167
Name:  ? Glyma.18G016700 Secondary Identifier:  ? PAC:30558742
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G016700 0.5kb upstream 0.5kb upstream 1842 true Chr18: 1192570-1194411 Glycine max
Glyma.18G016700 0.5kb upstream 0.5kb upstream 500 false Chr18: 1193912-1194411 Glycine max
Glyma.18G016700 0.5kb downstream 0.5kb downstream 1842 true Chr18: 1192070-1193911 Glycine max
Glyma.18G016700 0.5kb downstream 0.5kb downstream 500 false Chr18: 1192070-1192569 Glycine max
Glyma.18G016700 1.0kb upstream 1.0kb upstream 2342 true Chr18: 1192570-1194911 Glycine max
Glyma.18G016700 1.0kb upstream 1.0kb upstream 1000 false Chr18: 1193912-1194911 Glycine max
Glyma.18G016700 1.0kb downstream 1.0kb downstream 2342 true Chr18: 1191570-1193911 Glycine max
Glyma.18G016700 1.0kb downstream 1.0kb downstream 1000 false Chr18: 1191570-1192569 Glycine max
Glyma.18G016700 2.0kb upstream 2.0kb upstream 3342 true Chr18: 1192570-1195911 Glycine max
Glyma.18G016700 2.0kb upstream 2.0kb upstream 2000 false Chr18: 1193912-1195911 Glycine max
Glyma.18G016700 2.0kb downstream 2.0kb downstream 3342 true Chr18: 1190570-1193911 Glycine max
Glyma.18G016700 2.0kb downstream 2.0kb downstream 2000 false Chr18: 1190570-1192569 Glycine max
Glyma.18G016700 5.0kb upstream 5.0kb upstream 6342 true Chr18: 1192570-1198911 Glycine max
Glyma.18G016700 5.0kb upstream 5.0kb upstream 5000 false Chr18: 1193912-1198911 Glycine max
Glyma.18G016700 5.0kb downstream 5.0kb downstream 6342 true Chr18: 1187570-1193911 Glycine max
Glyma.18G016700 5.0kb downstream 5.0kb downstream 5000 false Chr18: 1187570-1192569 Glycine max
Glyma.18G016700 10.0kb upstream 10.0kb upstream 11342 true Chr18: 1192570-1203911 Glycine max
Glyma.18G016700 10.0kb upstream 10.0kb upstream 10000 false Chr18: 1193912-1203911 Glycine max
Glyma.18G016700 10.0kb downstream 10.0kb downstream 11342 true Chr18: 1182570-1193911 Glycine max
Glyma.18G016700 10.0kb downstream 10.0kb downstream 10000 false Chr18: 1182570-1192569 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299192 5265 Fabidae View MSA
124070921 5270 Rosid View MSA
123750703 5271 Pentapetalae View MSA
122786021 5272 Eudicot View MSA
122049146 5273 Angiosperm View MSA
121347779 5274 Embryophyte View MSA
123380625 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.02679 0.0 17.4343    
cufflinks 3.70023 0.0 11.5033    
cufflinks 1.8345 0.0 6.31099   Low
cufflinks 3.42122 0.0 10.7544    
cufflinks 6.7646 0.0 19.164    
cufflinks 8.53035 0.0 23.7345   High
cufflinks 3.919 0.0 11.9746    
cufflinks 4.86103 0.0 14.5058    
cufflinks 6.24103 0.0 17.9772    
cufflinks 3.209        
cufflinks 2.189        
cufflinks 2.117        
cufflinks 4.943       High
cufflinks 3.991        
cufflinks 0.969       Low
cufflinks 3.744        
cufflinks 2.661        
cufflinks 2.67        
cufflinks 2.557        
cufflinks 3.685        
cufflinks 2.896        
cufflinks 4.203        
cufflinks 3.911        
cufflinks 2.969        
cufflinks 3.497        
cufflinks 3.278        

0 Strain