Gene : Glyma.18G016800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24006:SF469 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4 Genomic Order:  168
Name:  ? Glyma.18G016800 Secondary Identifier:  ? PAC:30555270
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G016800 0.5kb upstream 0.5kb upstream 6034 true Chr18: 1197234-1203267 Glycine max
Glyma.18G016800 0.5kb upstream 0.5kb upstream 500 false Chr18: 1197234-1197733 Glycine max
Glyma.18G016800 0.5kb downstream 0.5kb downstream 6034 true Chr18: 1197734-1203767 Glycine max
Glyma.18G016800 0.5kb downstream 0.5kb downstream 500 false Chr18: 1203268-1203767 Glycine max
Glyma.18G016800 1.0kb upstream 1.0kb upstream 6534 true Chr18: 1196734-1203267 Glycine max
Glyma.18G016800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 1196734-1197733 Glycine max
Glyma.18G016800 1.0kb downstream 1.0kb downstream 6534 true Chr18: 1197734-1204267 Glycine max
Glyma.18G016800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 1203268-1204267 Glycine max
Glyma.18G016800 2.0kb upstream 2.0kb upstream 7534 true Chr18: 1195734-1203267 Glycine max
Glyma.18G016800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 1195734-1197733 Glycine max
Glyma.18G016800 2.0kb downstream 2.0kb downstream 7534 true Chr18: 1197734-1205267 Glycine max
Glyma.18G016800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 1203268-1205267 Glycine max
Glyma.18G016800 5.0kb upstream 5.0kb upstream 10534 true Chr18: 1192734-1203267 Glycine max
Glyma.18G016800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 1192734-1197733 Glycine max
Glyma.18G016800 5.0kb downstream 5.0kb downstream 10534 true Chr18: 1197734-1208267 Glycine max
Glyma.18G016800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 1203268-1208267 Glycine max
Glyma.18G016800 10.0kb upstream 10.0kb upstream 15534 true Chr18: 1187734-1203267 Glycine max
Glyma.18G016800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 1187734-1197733 Glycine max
Glyma.18G016800 10.0kb downstream 10.0kb downstream 15534 true Chr18: 1197734-1213267 Glycine max
Glyma.18G016800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 1203268-1213267 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255486 5265 Fabidae View MSA
124061352 5270 Rosid View MSA
123749945 5271 Pentapetalae View MSA
122787648 5272 Eudicot View MSA
122047391 5273 Angiosperm View MSA
121345894 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.88758 0.0 20.6704    
cufflinks 4.08969 0.0 15.5735   Low
cufflinks 7.98514 0.0 29.877    
cufflinks 7.58113 0.0 28.1223    
cufflinks 5.45001 0.0 22.1875    
cufflinks 10.8521 0.0 37.8944   High
cufflinks 4.68788 0.0 20.9851    
cufflinks 5.55074 0.0 23.1643    
cufflinks 5.25373 0.0 21.5844    
cufflinks 0.955        
cufflinks 0.727        
cufflinks 1.434       High
cufflinks 1.156        
cufflinks 1.172        
cufflinks 0.218       Low
cufflinks 0.815        
cufflinks 0.754        
cufflinks 1.558       High
cufflinks 0.754        
cufflinks 0.775        
cufflinks 0.902        
cufflinks 0.644        
cufflinks 0.923        
cufflinks 0.96        
cufflinks 0.704        
cufflinks 0.852        

0 Strain