Gene : Glyma.18G017000 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR24073:SF475 - RAS-RELATED PROTEIN RABH1C-RELATED Genomic Order:  170
Name:  ? Glyma.18G017000 Secondary Identifier:  ? PAC:30558476
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G017000 0.5kb upstream 0.5kb upstream 6124 true Chr18: 1213993-1220116 Glycine max
Glyma.18G017000 0.5kb upstream 0.5kb upstream 500 false Chr18: 1219617-1220116 Glycine max
Glyma.18G017000 0.5kb downstream 0.5kb downstream 6124 true Chr18: 1213493-1219616 Glycine max
Glyma.18G017000 0.5kb downstream 0.5kb downstream 500 false Chr18: 1213493-1213992 Glycine max
Glyma.18G017000 1.0kb upstream 1.0kb upstream 6624 true Chr18: 1213993-1220616 Glycine max
Glyma.18G017000 1.0kb upstream 1.0kb upstream 1000 false Chr18: 1219617-1220616 Glycine max
Glyma.18G017000 1.0kb downstream 1.0kb downstream 6624 true Chr18: 1212993-1219616 Glycine max
Glyma.18G017000 1.0kb downstream 1.0kb downstream 1000 false Chr18: 1212993-1213992 Glycine max
Glyma.18G017000 2.0kb upstream 2.0kb upstream 7624 true Chr18: 1213993-1221616 Glycine max
Glyma.18G017000 2.0kb upstream 2.0kb upstream 2000 false Chr18: 1219617-1221616 Glycine max
Glyma.18G017000 2.0kb downstream 2.0kb downstream 7624 true Chr18: 1211993-1219616 Glycine max
Glyma.18G017000 2.0kb downstream 2.0kb downstream 2000 false Chr18: 1211993-1213992 Glycine max
Glyma.18G017000 5.0kb upstream 5.0kb upstream 10624 true Chr18: 1213993-1224616 Glycine max
Glyma.18G017000 5.0kb upstream 5.0kb upstream 5000 false Chr18: 1219617-1224616 Glycine max
Glyma.18G017000 5.0kb downstream 5.0kb downstream 10624 true Chr18: 1208993-1219616 Glycine max
Glyma.18G017000 5.0kb downstream 5.0kb downstream 5000 false Chr18: 1208993-1213992 Glycine max
Glyma.18G017000 10.0kb upstream 10.0kb upstream 15624 true Chr18: 1213993-1229616 Glycine max
Glyma.18G017000 10.0kb upstream 10.0kb upstream 10000 false Chr18: 1219617-1229616 Glycine max
Glyma.18G017000 10.0kb downstream 10.0kb downstream 15624 true Chr18: 1203993-1219616 Glycine max
Glyma.18G017000 10.0kb downstream 10.0kb downstream 10000 false Chr18: 1203993-1213992 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316215 5265 Fabidae View MSA
124060621 5270 Rosid View MSA
123736861 5271 Pentapetalae View MSA
122786140 5272 Eudicot View MSA
122049547 5273 Angiosperm View MSA
121350037 5274 Embryophyte View MSA
123428203 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.83996 0.0 17.2784    
cufflinks 1.14849 0.0 7.89138   Low
cufflinks 3.70936 0.0 13.3772    
cufflinks 2.52502 0.0 11.5142    
cufflinks 2.71634 0.0 16.2083    
cufflinks 6.58338 0.0 24.5521   High
cufflinks 1.8255 0.0 14.4668    
cufflinks 3.53516 0.0 14.414    
cufflinks 3.63297 0.0 16.3388    
cufflinks 0.565        
cufflinks 1.889       High
cufflinks 1.023        
cufflinks 0.753        
cufflinks 0.521        
cufflinks 0.987        
cufflinks 0.48        
cufflinks 1.801       High
cufflinks 0.881        
cufflinks 0.602        
cufflinks 0.376       Low
cufflinks 2.36       High
cufflinks 0.455        
cufflinks 0.452        
cufflinks 2.777       High
cufflinks 0.347       Low
cufflinks 1.827       High

0 Strain