Gene : Glyma.18G018100 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR10788:SF19 - TREHALOSE-PHOSPHATE PHOSPHATASE E-RELATED Genomic Order:  181
Name:  ? Glyma.18G018100 Secondary Identifier:  ? PAC:30555644
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G018100 0.5kb upstream 0.5kb upstream 3692 true Chr18: 1312068-1315759 Glycine max
Glyma.18G018100 0.5kb upstream 0.5kb upstream 500 false Chr18: 1315260-1315759 Glycine max
Glyma.18G018100 0.5kb downstream 0.5kb downstream 3692 true Chr18: 1311568-1315259 Glycine max
Glyma.18G018100 0.5kb downstream 0.5kb downstream 500 false Chr18: 1311568-1312067 Glycine max
Glyma.18G018100 1.0kb upstream 1.0kb upstream 4192 true Chr18: 1312068-1316259 Glycine max
Glyma.18G018100 1.0kb upstream 1.0kb upstream 1000 false Chr18: 1315260-1316259 Glycine max
Glyma.18G018100 1.0kb downstream 1.0kb downstream 4192 true Chr18: 1311068-1315259 Glycine max
Glyma.18G018100 1.0kb downstream 1.0kb downstream 1000 false Chr18: 1311068-1312067 Glycine max
Glyma.18G018100 2.0kb upstream 2.0kb upstream 5192 true Chr18: 1312068-1317259 Glycine max
Glyma.18G018100 2.0kb upstream 2.0kb upstream 2000 false Chr18: 1315260-1317259 Glycine max
Glyma.18G018100 2.0kb downstream 2.0kb downstream 5192 true Chr18: 1310068-1315259 Glycine max
Glyma.18G018100 2.0kb downstream 2.0kb downstream 2000 false Chr18: 1310068-1312067 Glycine max
Glyma.18G018100 5.0kb upstream 5.0kb upstream 8192 true Chr18: 1312068-1320259 Glycine max
Glyma.18G018100 5.0kb upstream 5.0kb upstream 5000 false Chr18: 1315260-1320259 Glycine max
Glyma.18G018100 5.0kb downstream 5.0kb downstream 8192 true Chr18: 1307068-1315259 Glycine max
Glyma.18G018100 5.0kb downstream 5.0kb downstream 5000 false Chr18: 1307068-1312067 Glycine max
Glyma.18G018100 10.0kb upstream 10.0kb upstream 13192 true Chr18: 1312068-1325259 Glycine max
Glyma.18G018100 10.0kb upstream 10.0kb upstream 10000 false Chr18: 1315260-1325259 Glycine max
Glyma.18G018100 10.0kb downstream 10.0kb downstream 13192 true Chr18: 1302068-1315259 Glycine max
Glyma.18G018100 10.0kb downstream 10.0kb downstream 10000 false Chr18: 1302068-1312067 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305274 5265 Fabidae View MSA
124069564 5270 Rosid View MSA
123746966 5271 Pentapetalae View MSA
122786046 5272 Eudicot View MSA
122042129 5273 Angiosperm View MSA
121351669 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.26021 0.0 0.993709    
cufflinks 1.68138 0.0 5.68219    
cufflinks 1.56387 0.0 5.32382    
cufflinks 0.465759 0.0 1.73093    
cufflinks 1.7835 0.0 6.00054    
cufflinks 0.0241343 0.0 0.103428 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.10701 0.0 9.63916    
cufflinks 3.06727 0.0 9.55737    
cufflinks 0.134       Low
cufflinks 5.518     High High
cufflinks 1.27        
cufflinks 0.314        
cufflinks 0.195        
cufflinks 0.982        
cufflinks 0.41        
cufflinks 1.911        
cufflinks 1.216        
cufflinks 0.414        
cufflinks 0.078     Low Low
cufflinks 4.861       High
cufflinks 0.177        
cufflinks 0.096     Low Low
cufflinks 13.288     High High
cufflinks 0.401        
cufflinks 8.276     High High

0 Strain